Burkholderia vietnamiensis 2003Ycf867 |
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Putative Burkholderia vietnamiensis 2003Ycf867 RM systems
Ref: Schaumburg,F. et al. Microb Drug Resist (2022) In press
REBASE ref # 34549
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,275,779 bp | CP090786 |
| plasmid p1_2003Ycf867: | 73,850 bp | CP090789 |
REBASE acronym: Bvi867
Org_num: 58403
All begin L0Y95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 14410 | glucarate dehydratase | |||
| 14415 | M | M.Bps61901ORF2839P (92% identity) | M.Bvi867ORF14415P | |
| 14420 | AAA family ATPase | |||
| 14425 | S | S.CmeDORF107310P (57% identity) | S.Bvi867ORF14415P | |
| 14430 | R | BpsR983ORF1209P (90% identity) | Bvi867ORF14415P | |
| 14435 | IS21 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 395 | DNA phosphorothioation-associated putative | |||
| 400 | R | Bgl9475SspFP (86% identity) | Bvi867SspFP | |
| 405 | R | Xtr034SspGP (76% identity) | Bvi867SspGP | |
| 410 | R | Xtr034SspHP (80% identity) | Bvi867SspHP | |
| 415 | 235 aa hypothetical protein | |||
| 420 | nucleoside 2-deoxyribosyltransferase | |||
| 425 | 95 aa hypothetical protein | |||
| 430 | 307 aa hypothetical protein | |||
| 435 | M | M.Bgl9475SspDP (93% identity) | M.Bvi867SspDP | |
| 440 | M | M.Xtr034SspCP (86% identity) | M.Bvi867SspCP | |
| 445 | M | M.BpsDSspBP (98% identity) | M.Bvi867SspBP | |
| 450 | 122 aa hypothetical protein | |||
| 3695 | site-specific integrase | |||
| 3700 | V | V.MbrS285ORF16790P (50% identity) | V.Bvi867ORF3705P | |
| 3705 | M | M.SspSGTMORF22990P (57% identity) | M.Bvi867ORF3705P | |
| 3710 | R | Bgl41cORF65P (55% identity) | Bvi867ORF3705P | |
| 3715 | helix-turn-helix domain-containing protein | |||
| 3920 | DUF2514 domain-containing protein | |||
| 3925 | M | M.BspB53ORF17645P (100% identity) | M.Bvi867ORF3925P | |
| 3930 | immunity 52 family protein | |||
| plasmid p1_2003Ycf867 | ||||
| 29170 | enoyl-ACP reductase | |||
| 29175 | M | M.Bco15631ORF38710P (95% identity) | M.Bvi867ORF29175P | |
| 29180 | DUF3560 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 195 | porin | |||
| 200 | M | M.BviFLORF125P (99% identity) | CACAG | M.Bvi867ORF200P |
| 205 | R | Bvi239IP (99% identity) | CACAG | Bvi867ORF200P |
| 210 | 125 aa hypothetical protein | |||