Escherichia coli STEFF_1 |
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Putative Escherichia coli STEFF_1 RM systems
Ref: Che,Y. et al. Microbiome 10 (1) (2022)
REBASE ref # 34444
| Sequence length: | GenBank #: | |
| Chromosome: | 4,988,995 bp | CP048609 |
| plasmid unnamed1: | 119,126 bp | CP048610 |
| plasmid unnamed2: | 95,952 bp | CP048611 |
| plasmid unnamed3: | 88,925 bp | CP048612 |
REBASE acronym: EcoSTEFF1
Org_num: 57960
All begin G3M66_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2055 | cell division protein DamX | |||
| 2060 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoSTEFF1DamP |
| 2065 | ribulose-phosphate 3-epimerase | |||
| 2585 | DUF2556 domain-containing protein | |||
| 2590 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoSTEFF1ORF2590P |
| 2595 | DNA-binding transcriptional regulator Fis | |||
| 13825 | drug/metabolite exporter YedA | |||
| 13830 | V | V.EcoWW2DcmP (100% identity) | V.EcoSTEFF1DcmP | |
| 13835 | M | M.EcoWW2DcmP (100% identity) | CCWGG | M.EcoSTEFF1DcmP |
| 13840 | phosphohydrolase | |||
| 17095 | 63 aa hypothetical protein | |||
| 17100 | M | M.EcoWW2ORF16975P (100% identity) | M.EcoSTEFF1ORF17100P | |
| 17105 | TrmB family transcriptional regulator | |||
| 20085 | phage lysis protein EssD | |||
| 20090 | M | M.EcoNDM5ORFFP (100% identity) | M.EcoSTEFF1ORF20090P | |
| 20095 | 67 aa hypothetical protein | |||
| 20120 | LexA family transcriptional regulator | |||
| 20125 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoSTEFF1ORF20125P |
| 20130 | PerC family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24345 | 73 aa hypothetical protein | |||
| 24350 | M | M.KpnVA569ORF28145P (100% identity) | M.EcoSTEFF1ORF24350P | |
| 24355 | 102 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 24535 | recombination-associated protein RdgC | |||
| 24540 | M | M.Eco3359ORF25270P (100% identity) | M.EcoSTEFF1ORF24540P | |
| 24555 | SPFH/Band 7/PHB domain protein | |||
| plasmid unnamed3 | ||||
| 25130 | 103 aa hypothetical protein | |||
| 25135 | M | M.StyR64ORFAP (100% identity) | M.EcoSTEFF1ORF25135P | |
| 25140 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20350 | BrnT family toxin | |||
| 20355 | R | EcoPK12MrrP (100% identity) | EcoSTEFF1MrrP | |
| 20360 | SAM-dependent DNA methyltransferase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7510 | recombination protein NinB | |||
| 7515 | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.EcoSTEFF1ORF7515P |
| 7520 | protein ninD | |||