Shigella flexneri P099 |
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Putative Shigella flexneri P099 RM systems
Ref: Kim,S. et al. unpublished
REBASE ref # 34406
| Sequence length: | GenBank #: | |
| Chromosome: | 4,594,703 bp | CP085202 |
| plasmid p001: | 206,206 bp | CP085203 |
REBASE acronym: SflP099
Org_num: 57899
All begin IUX27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20040 | IS1 family transposase | |||
| 20045 | R | SflTORF4636P (100% identity) | GTANNNNNNNNGTCY | SflP099ORF20050P |
| 20050 | M | M.SspS13ORF3945P (100% identity) | GTANNNNNNNNGTCY | M.SflP099ORF20050P |
| 20055 | S | S.SflPE577ORF23095P (100% identity) | GTANNNNNNNNGTCY | S.SflP099ORF20050P |
| 20060 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2415 | DUF2556 family protein | |||
| 2420 | M | M.SflTORF3517P (100% identity) | ATGCAT | M.SflP099ORF2420P |
| 2425 | DNA-binding transcriptional regulator Fis | |||
| 9075 | phosphohydrolase | |||
| 9080 | M | M.SflTDcmP (100% identity) | CCWGG | M.SflP099DcmP |
| 9085 | V | V.SflTDcmP (100% identity) | CCWGG | V.SflP099DcmP |
| 9090 | drug/metabolite exporter YedA | |||
| 15625 | replication endonuclease | |||
| 15630 | M | M.Sen5753ORF16500P (100% identity) | GATC | M.SflP099ORF15630P |
| 15635 | TraR/DksA family transcriptional regulator | |||
| 21415 | ribulose-phosphate 3-epimerase | |||
| 21420 | M | M.SflTDamP (100% identity) | GATC | M.SflP099DamP |
| 21425 | cell division protein DamX | |||
| plasmid p001 | ||||
| 24185 | 103 aa hypothetical protein | |||
| 24190 | M | M.SflM2901ORF24340P (100% identity) | M.SflP099ORF24190P | |
| 24195 | 73 aa hypothetical protein | |||