Clostridioides difficile CDB |
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Putative Clostridioides difficile CDB RM systems
Ref: Wang,L. et al. unpublished
REBASE ref # 34119
Complete sequence: 4,234,172 bp
GenBank #: CP090060
REBASE acronym: CdiCDB
Org_num: 56942
All begin LWC40_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14450 | patatin-like phospholipase family protein | |||
| 14455 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.CdiCDBORF14455P |
| 14460 | Rrf2 family transcriptional regulator | |||
| 15385 | RusA family crossover junction | |||
| 15390 | M | M.Pdi630ORF9350P (100% identity) | TGGCCA | M.CdiCDBORF15390P |
| 15395 | zinc-ribbon domain-containing protein | |||
| 15430 | 69 aa hypothetical protein | |||
| 15435 | M | M.PdiZ31ORF1645P (100% identity) | M.CdiCDBORF15435P | |
| 15440 | 91 aa hypothetical protein | |||
| 16510 | class B sortase | |||
| 16515 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.CdiCDBORF16515P |
| 16520 | DrmE family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10785 | sigma 54-interacting transcriptional regulator | |||
| 10790 | R | Pdi630McrCP (100% identity) | CdiCDBMcrCP | |
| 10795 | R | Pdi6602McrBP (100% identity) | CdiCDBMcrBP | |
| 10800 | cell division protein | |||