Pseudomonas amygdali pv. aesculi JBJ5 |
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Putative Pseudomonas amygdali pv. aesculi JBJ5 RM systems
Ref: Gylling,M. et al. unpublished
REBASE ref # 34140
| Sequence length: | GenBank #: | |
| Chromosome: | 6,034,206 bp | CP093431 |
| plasmid pGYL5: | 49,730 bp | CP093437 |
REBASE acronym: PamJBJ5
Org_num: 56990
All begin MDO45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 26215 | IS5 family transposase | |||
| ??? | S | S1.Pams2250ORF26410P (100% identity) | S1.PamJBJ5ORF26220P | |
| 26225 | IS5-like element ISPsy2 family transposase | |||
| 26230 | S | S2.Pams2250ORF26410P (100% identity) | S2.PamJBJ5ORF26220P | |
| 26235 | AAA family ATPase | |||
| 26240 | R | Pams2250ORF26410P (100% identity) | PamJBJ5ORF26220P | |
| 26245 | IS5 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4875 | TIGR03757 family integrating conjugative element | |||
| 4880 | RM | Pams2250ORF4865P (100% identity) | PamJBJ5ORF4880P | |
| 4885 | DEAD/DEAH box helicase | |||
| 18495 | SNF2-related protein | |||
| 18500 | R | PsyPs25ORF29110P (100% identity) | GTCGAC | PamJBJ5ORF18505P |
| 18505 | M | M.Pams2250ORF18760P (100% identity) | M.PamJBJ5ORF18505P | |
| 18510 | plasmid-related protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pGYL5 | ||||
| 29485 | type II toxin-antitoxin system PemK/MazF family | |||
| ??? | R | Pams2250ORF29425P (100% identity) | PamJBJ5ORF29505P | |
| 29500 | 68 aa hypothetical protein | |||
| 29505 | M | M.Pam2250ORFDP (100% identity) | M.PamJBJ5ORF29505P | |
| 29510 | UvrD-helicase domain-containing protein | |||