Shinella species H4-D48 |
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Putative Shinella species H4-D48 RM systems
Ref: Behrendt,U. et al. unpublished
REBASE ref # 34113
Complete sequence: 3,477,580 bp
GenBank #: CP093337
REBASE acronym: SspD48
Org_num: 56925
All begin MNR02_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13540 | M48 family metallopeptidase | |||
| 13545 | R | Atu5AORF26860P (94% identity) | SspD48ORF13555P | |
| 13550 | S | S.Bce350ORFBP (29% identity) | S.SspD48ORF13555P | |
| 13555 | M | M.Rsp2ORF9600P (96% identity) | M.SspD48ORF13555P | |
| 13560 | 265 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8905 | NAD(P)H:quinone oxidoreductase type IV | |||
| 8915 | M | M.Sgr3480ORFEP (45% identity) | M1.SspD48ORF8915P | |
| ??? | M | M1.Sgr13350III (47% identity) | M2.SspD48ORF8915P | |
| 8925 | R | VpaK32ORFAP (36% identity) | SspD48ORF8915P | |
| 8930 | 112 aa hypothetical protein | |||
| 14880 | 50S ribosomal protein L32 | |||
| 14885 | R | AtuA74aSspDP (88% identity) | SspD48ORF14890P | |
| 14890 | M | M.Rle4643SspDP (95% identity) | M.SspD48ORF14890P | |
| 14895 | V | V.AtuA74aSspDP (83% identity) | V.SspD48ORF14890P | |
| 14900 | 422 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12690 | HAD family phosphatase | |||
| 12695 | M | M.Ssu953SspDP (98% identity) | M.SspD48ORF12695P | |
| 12700 | VWA domain-containing protein | |||