Escherichia coli LC-1302-2020 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli LC-1302-2020 RM systems
Ref: Campos-Madueno,E.I. and Endimiani,A. unpublished
REBASE ref # 31925
| Sequence length: | GenBank #: | |
| Chromosome: | 5,016,530 bp | CP091756 |
| plasmid p1-LC-1302-2020-KPC3: | 298,935 bp | CP091757 |
REBASE acronym: Eco22020
Org_num: 56806
All begin L6507_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p1-LC-1302-2020-KPC3 | ||||
| 25670 | 71 aa hypothetical protein | |||
| 25675 | M | M.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | M.Eco22020ORF25675P |
| 25680 | S | S.Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | S.Eco22020ORF25675P |
| 25685 | R | Sen42919ORF11180P (100% identity) | ACGNNNNNNCTG | Eco22020ORF25675P |
| 25690 | ISL3-like element ISKpn25 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1815 | cell division protein DamX | |||
| 1820 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco22020DamP |
| 1825 | ribulose-phosphate 3-epimerase | |||
| 2450 | DUF2556 family protein | |||
| 2455 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco22020ORF2455P |
| 2460 | DNA-binding transcriptional regulator Fis | |||
| 9690 | phosphohydrolase | |||
| 9695 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco22020DcmP |
| 9700 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco22020DcmP |
| 9705 | drug/metabolite exporter YedA | |||
| 16315 | NinE family protein | |||
| 16320 | M | M.EcoR11ORF20620P (100% identity) | GATC | M.Eco22020ORF16320P |
| 16325 | recombination protein NinB | |||
| plasmid p1-LC-1302-2020-KPC3 | ||||
| 24910 | EAL domain-containing protein | |||
| 24915 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco22020ORF24920P |
| 24920 | M | M.YpsR2ORFAP (100% identity) | CCWGG | M.Eco22020ORF24920P |
| 24925 | IS1 family transposase | |||
| 25610 | 73 aa hypothetical protein | |||
| 25615 | M | M.SmaBWH35ORF25885P (100% identity) | M.Eco22020ORF25615P | |
| 25620 | 56 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20560 | GTPase | |||
| 20565 | R | Ssp28760MrrP (100% identity) | Eco22020MrrP | |
| 20570 | type I restriction-modification system | |||
| 20585 | endoribonuclease SymE | |||
| 20590 | R | Ssp28760McrBP (100% identity) | Eco22020McrBP | |
| 20595 | R | Ssp28760McrCP (100% identity) | Eco22020McrCP | |