Escherichia coli 81 |
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Putative Escherichia coli 81 RM systems
Ref: Luo,Q. unpublished
REBASE ref # 34072
Complete sequence: 4,785,944 bp
GenBank #: CP088131
REBASE acronym: Ecos81
Org_num: 56781
All begin LRM32_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3950 | IS5 family transposase | |||
| 3955 | M | M.Kva81ORF30120P (99% identity) | M.Ecos81ORF3955P | |
| 3960 | S | S.Eco0031ORFEP (64% identity) | S.Ecos81ORF3955P | |
| 3965 | R | Ero925ORF20445P (99% identity) | Ecos81ORF3955P | |
| 3970 | transposase | |||
| 5925 | 197 aa hypothetical protein | |||
| 5930 | R | Kqu610ORF5290P (100% identity) | GGANNNNNCTC | Ecos81ORF5940P |
| 5935 | S | S.Ror24150ORF17255P (100% identity) | GGANNNNNCTC | S.Ecos81ORF5940P |
| 5940 | M | M.KpnS1313ORF16435P (98% identity) | GGANNNNNCTC | M.Ecos81ORF5940P |
| 5945 | IS1 family transposase | |||
| 9765 | IS110 family transposase | |||
| 9770 | M | M.CsaC767ORF12270P (56% identity) | GATGNNNNNNTTG | M.Ecos81ORF9770P |
| 9775 | S | S.CsaC767ORF12270P (100% identity) | GATGNNNNNNTTG | S.Ecos81ORF9770P |
| 9780 | YecA family protein | |||
| 9785 | R | EroN260ORF29240P (99% identity) | GATGNNNNNNTTG | Ecos81ORF9770P |
| 9790 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1680 | cell division protein DamX | |||
| 1685 | M | M.SspPIBDamP (100% identity) | GATC | M.Ecos81DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 9415 | phosphohydrolase | |||
| 9420 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Ecos81DcmP |
| 9425 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Ecos81DcmP |
| 9430 | drug/metabolite exporter YedA | |||
| 11605 | DUF977 family protein | |||
| 11610 | M | M.Ecoi029ORF11125P (99% identity) | M.Ecos81ORF11610P | |
| 11615 | 139 aa hypothetical protein | |||
| 18535 | integrase | |||
| 18540 | R | EcoS43ORF4220P (100% identity) | YGGCCR | Ecos81ORF18545P |
| 18545 | M | M.PanLORF19300P (100% identity) | YGGCCR | M.Ecos81ORF18545P |
| 18550 | integrase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18675 | IS5 family transposase | |||
| 18680 | R | Eco49610ORF18135P (100% identity) | Ecos81ORF18685P | |
| 18685 | M | M.EcoNIH5II (48% identity) | M.Ecos81ORF18685BP | |
| 18690 | IS5-like element IS5 family transposase | |||
| 18695 | M | M.EcoNIH5II (38% identity) | M.Ecos81ORF18685AP | |
| 18700 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20215 | endoribonuclease SymE | |||
| 20220 | R | SflLIN8GmrSDP (55% identity) | Ecos81GmrSDP | |
| 20225 | R | SflLIN8GmrSDP (42% identity) | Ecos81GmrSP | |
| 20230 | cytoplasmic protein | |||