Escherichia coli EC5 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC5 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,801,130 bp | CP060969 |
| plasmid pEC5-3: | 111,472 bp | CP060971 |
REBASE acronym: EcosEC5
Org_num: 56801
All begin H9193_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1775 | cell division protein DamX | |||
| 1780 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosEC5DamP |
| 1785 | ribulose-phosphate 3-epimerase | |||
| 3540 | DEAD/DEAH box helicase | |||
| 3545 | RM | SflLIN17ORF3140P (100% identity) | EcosEC5ORF3545P | |
| 3550 | transposase | |||
| 9000 | phosphohydrolase | |||
| 9005 | M | M.EcosEC4DcmP (100% identity) | CCWGG | M.EcosEC5DcmP |
| 9010 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.EcosEC5DcmP |
| 9015 | drug/metabolite exporter YedA | |||
| 9425 | HNH endonuclease | |||
| 9430 | M | M.Eco2020ORF6320P (100% identity) | M.EcosEC5ORF9430P | |
| 9435 | YqaJ viral recombinase family protein | |||
| 20110 | osmoprotectant transport activator ProQ | |||
| 20115 | M | M.SflFF24DndBP (100% identity) | M.EcosEC5DndBP | |
| 20120 | DNA phosphorothioation system sulfurtransferase | |||
| 20115 | DNA sulfur modification protein DndB | |||
| 20120 | M | M.SflFF24DndCP (100% identity) | M.EcosEC5DndCP | |
| 20125 | DNA sulfur modification protein DndD | |||
| 20120 | DNA phosphorothioation system sulfurtransferase | |||
| 20125 | M | M.SflFF24DndDP (100% identity) | M.EcosEC5DndDP | |
| 20130 | DNA sulfur modification protein DndE | |||
| 20125 | DNA sulfur modification protein DndD | |||
| 20130 | M | M.SflFF24DndEP (100% identity) | M.EcosEC5DndEP | |
| 20135 | 128 aa hypothetical protein | |||
| 20165 | accessory gene regulator B family protein | |||
| 20170 | R | EcoYJ4DptHP (100% identity) | EcosEC5DptHP | |
| 20175 | DNA phosphorothioation-dependent restriction | |||
| 20170 | DNA phosphorothioation-dependent restriction | |||
| 20175 | R | SflFF24DptGP (100% identity) | EcosEC5DptGP | |
| 20180 | DNA phosphorothioation-dependent restriction | |||
| 20175 | DNA phosphorothioation-dependent restriction | |||
| 20180 | R | SflFF24DptFP (100% identity) | EcosEC5DptFP | |
| 20185 | porin family protein | |||
| plasmid pEC5-3 | ||||
| 24190 | 97 aa hypothetical protein | |||
| 24195 | M | M.Xca80ORFEP (100% identity) | M.EcosEC5ORF24195P | |
| 24200 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pEC5-3 | ||||
| 23910 | site-specific DNA-methyltransferase | |||
| 23915 | R | SspS13ORF650P (100% identity) | EcosEC5ORF23915P | |
| 23920 | mobilization protein MobX | |||