Escherichia coli EC9 |
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Putative Escherichia coli EC9 RM systems
Ref: Ruan,Z. unpublished
REBASE ref # 31265
| Sequence length: | GenBank #: | |
| Chromosome: | 4,880,174 bp | CP060950 |
| plasmid pEC9-2: | 87,111 bp | CP060951 |
REBASE acronym: EcosEC9
Org_num: 56804
All begin H9196_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12750 | endoribonuclease SymE | |||
| 12755 | R | EcoSCU113ORF19245P (100% identity) | GACNNNNNTRRG | EcosEC9ORF12765P |
| 12760 | S | S.EcoSCU113ORF19245P (100% identity) | GACNNNNNTRRG | S.EcosEC9ORF12765P |
| 12765 | M | M.Esp9308ORFIP (100% identity) | GACNNNNNTRRG | M.EcosEC9ORF12765P |
| 12770 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 450 | 73 aa hypothetical protein | |||
| 455 | M | M.Xca80ORFEP (100% identity) | M.EcosEC9ORF455P | |
| 460 | 97 aa hypothetical protein | |||
| 3335 | ribosome-associated translation inhibitor RaiA | |||
| 3340 | M | M.SenYU39ORF1896P (100% identity) | M.EcosEC9ORF3340P | |
| 3345 | Com family DNA-binding transcriptional | |||
| 7675 | ribulose-phosphate 3-epimerase | |||
| 7680 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcosEC9DamP |
| 7685 | cell division protein DamX | |||
| 12345 | cell surface composition regulator GlgS | |||
| 12350 | R | SflN107ORF20240P (100% identity) | EcosEC9ORF12350P | |
| 12355 | conjugal transfer protein TraG N-terminal | |||
| 12565 | 332 aa hypothetical protein | |||
| 12570 | R | EcoVL08ORF3245P (100% identity) | EcosEC9ORF12570P | |
| 12575 | HNH endonuclease | |||
| 22965 | drug/metabolite exporter YedA | |||
| 22970 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcosEC9DcmP |
| 22975 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcosEC9DcmP |
| 22980 | phosphohydrolase | |||
| plasmid pEC9-2 | ||||
| 23570 | 104 aa hypothetical protein | |||
| 23575 | M | M.Sso866ORF27155P (100% identity) | M.EcosEC9ORF23575P | |
| 23580 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12765 | type I restriction-modification system subunit | |||
| 12770 | R | EcoPSJ07MrrP (100% identity) | EcosEC9MrrP | |
| 12775 | BrnT family toxin | |||