Shigella flexneri STLIN_8 |
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Putative Shigella flexneri STLIN_8 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,751,737 bp
GenBank #: CP058796
REBASE acronym: SflLIN8
Org_num: 56711
All begin HZT12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18465 | HigA family addiction module antidote protein | |||
| 18470 | R | EroN260ORF10120P (99% identity) | SflLIN8ORF18485P | |
| 18475 | DUF4268 domain-containing protein | |||
| 18480 | S | S.Ecl42ORF4790P (100% identity) | S.SflLIN8ORF18485P | |
| 18485 | M | M.Ecl42ORF4790P (100% identity) | M.SflLIN8ORF18485P | |
| 18490 | GNAT family N-acetyltransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2285 | DUF2556 family protein | |||
| 2290 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.SflLIN8ORF2290P |
| 2295 | DNA-binding transcriptional regulator Fis | |||
| 9275 | phosphohydrolase | |||
| 9280 | M | M.SspS13DcmP (100% identity) | CCWGG | M.SflLIN8DcmP |
| 9285 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.SflLIN8DcmP |
| 9290 | drug/metabolite exporter YedA | |||
| 15445 | replication endonuclease | |||
| 15450 | M | M.EcoE47ORF17645P (100% identity) | GATC | M.SflLIN8ORF15450P |
| 15455 | TraR/DksA family transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9070 | IS1 family transposase | |||
| 9075 | M | M.SenMAC15ORF10230P (8% identity) | M.SflLIN8ORF9075P | |
| 9080 | R | Cfr354ORF32890P (99% identity) | SflLIN8ORF9075P | |
| 9085 | shufflon system plasmid conjugative transfer | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20175 | endoribonuclease SymE | |||
| 20180 | R | Eco8S19GmrSDP (100% identity) | SflLIN8GmrSDP | |
| 20185 | DUF1127 domain-containing protein | |||