Shigella flexneri STLIN_6 |
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Putative Shigella flexneri STLIN_6 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,831,609 bp
GenBank #: CP058790
REBASE acronym: SflLIN6
Org_num: 56710
All begin HZT08_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1710 | cell division protein DamX | |||
| 1715 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflLIN6DamP |
| 1720 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.SflLIN6ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 9160 | phosphohydrolase | |||
| 9165 | M | M.SflFF22DcmP (100% identity) | CCWGG | M.SflLIN6DcmP |
| 9170 | V | V.SsoSE61DcmP (99% identity) | V.SflLIN6DcmP | |
| 9175 | drug/metabolite exporter YedA | |||
| 14895 | replication endonuclease | |||
| 14900 | M | M.Eco22C09ORF7805P (100% identity) | GATC | M.SflLIN6ORF14900P |
| 14905 | TraR/DksA family transcriptional regulator | |||
| 15400 | NinE family protein | |||
| 15405 | M | M.SflN97ORF15810P (100% identity) | GATC | M.SflLIN6ORF15405P |
| 15410 | recombination protein NinB | |||
| 17900 | phage lysis protein EssD | |||
| 17905 | M | M.Sso63633ORF22290P (99% identity) | M.SflLIN6ORF17905P | |
| 17910 | 67 aa hypothetical protein | |||
| 19745 | BREX-1 system phosphatase PglZ type A | |||
| 19750 | RM | Pmi27ORFBP (100% identity) | SflLIN6ORF19750P | |
| 19755 | DUF262 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13280 | isocitrate dehydrogenase | |||
| 13285 | R | Efe1438GmrSDP (99% identity) | SflLIN6GmrSDP | |
| 13290 | recombinase family protein | |||