Shigella flexneri STLEFF_36 |
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Putative Shigella flexneri STLEFF_36 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,649,680 bp
GenBank #: CP058849
REBASE acronym: SflFF36
Org_num: 56704
All begin HZT28_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.SflFF36ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 6640 | recombination protein NinB | |||
| 6645 | M | M.SflFF33ORF6655P (100% identity) | GATC | M.SflFF36ORF6645P |
| 6650 | NinE family protein | |||
| 8860 | phosphohydrolase | |||
| 8865 | M | M.SspS13DcmP (100% identity) | CCWGG | M.SflFF36DcmP |
| 8870 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.SflFF36DcmP |
| 8875 | drug/metabolite exporter YedA | |||
| 10840 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.SflFF36ORF10845P | |
| 10850 | IS66-like element ISEc22 family transposase | |||
| 14645 | replication endonuclease | |||
| 14650 | M | M.SflN92ORF14970P (100% identity) | GATC | M.SflFF36ORF14650P |
| 14655 | TraR/DksA family transcriptional regulator | |||
| 19180 | HNH endonuclease | |||
| 19185 | R | SflSTLE4ORF19250P (100% identity) | SflFF36ORF19185P | |
| 19190 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19185 | HNH endonuclease | |||
| 19190 | R | SflSTLE4McrCP (100% identity) | SflFF36McrCP | |
| 19195 | R | SflSTLE4McrBP (100% identity) | SflFF36McrBP | |
| 19200 | DUF4942 domain-containing protein | |||