Shigella flexneri STLEFF_33 |
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Putative Shigella flexneri STLEFF_33 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,649,861 bp
GenBank #: CP058886
REBASE acronym: SflFF33
Org_num: 56701
All begin HZT25_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.SflFF33ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 6650 | recombination protein NinB | |||
| 6655 | M | M.SflFF36ORF6645P (100% identity) | GATC | M.SflFF33ORF6655P |
| 6660 | NinE family protein | |||
| 8875 | phosphohydrolase | |||
| 8880 | M | M.SspS13DcmP (100% identity) | CCWGG | M.SflFF33DcmP |
| 8885 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.SflFF33DcmP |
| 8890 | drug/metabolite exporter YedA | |||
| 10860 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.SflFF33ORF10865P | |
| 10870 | IS66-like element ISEc22 family transposase | |||
| 14665 | replication endonuclease | |||
| 14670 | M | M.SflN92ORF14970P (100% identity) | GATC | M.SflFF33ORF14670P |
| 14675 | TraR/DksA family transcriptional regulator | |||
| 19205 | HNH endonuclease | |||
| 19210 | R | SflSTLE4ORF19250P (100% identity) | SflFF33ORF19210P | |
| 19215 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19210 | HNH endonuclease | |||
| 19215 | R | SflSTLE4McrCP (100% identity) | SflFF33McrCP | |
| 19220 | R | SflSTLE4McrBP (100% identity) | SflFF33McrBP | |
| 19225 | DUF4942 domain-containing protein | |||