Shigella flexneri STLE3 |
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Putative Shigella flexneri STLE3 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 4,785,827 bp | CP058828 |
| plasmid unnamed1: | 169,932 bp | CP058829 |
REBASE acronym: SflSTLE3
Org_num: 56698
All begin HZT20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19320 | restriction endonuclease | |||
| 19325 | M | M.EcoZ063ORF19775P (100% identity) | AGCANNNNNNTGA | M.SflSTLE3ORF19325P |
| 19330 | S | S.EcoSTEC506ORF20895P (100% identity) | AGCANNNNNNTGA | S.SflSTLE3ORF19325P |
| 19335 | R | EcoSF10ORF15975P (100% identity) | AGCANNNNNNTGA | SflSTLE3ORF19325P |
| 19340 | endoribonuclease SymE | |||
| plasmid unnamed1 | ||||
| 22765 | IS3 family transposase | |||
| 22770 | R | SflFF64ORF5405P (100% identity) | SflSTLE3ORF22785P | |
| 22775 | DUF4268 domain-containing protein | |||
| 22780 | S | S.Sen557928ORF18960P (98% identity) | S.SflSTLE3ORF22785P | |
| 22785 | M | M.Sen557928ORF18960P (100% identity) | M.SflSTLE3ORF22785P | |
| 22790 | SPFH/Band 7/PHB domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2505 | DUF2556 family protein | |||
| 2510 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.SflSTLE3ORF2510P |
| 2515 | DNA-binding transcriptional regulator Fis | |||
| 3955 | DEAD/DEAH box helicase | |||
| 3960 | RM | EcoR0233ORF3995P (99% identity) | SflSTLE3ORF3960P | |
| 8760 | HD domain-containing protein | |||
| 8765 | M | M.EcosS1DcmP (100% identity) | CCWGG | M.SflSTLE3DcmP |
| 8770 | V | V.EcosS1DcmP (100% identity) | CCWGG | V.SflSTLE3DcmP |
| 8775 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19315 | BrnT family toxin | |||
| 19320 | R | EcoZ063MrrP (100% identity) | SflSTLE3MrrP | |
| 19325 | type I restriction-modification system subunit | |||