Shigella flexneri STLE1 |
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Putative Shigella flexneri STLE1 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,510,774 bp
GenBank #: CP058826
REBASE acronym: SflSTLE1
Org_num: 56697
All begin HZT18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18645 | IS1 family transposase | |||
| 18650 | M | M.EcoYJ6ORFCP (99% identity) | M.SflSTLE1ORF18650P | |
| 18655 | DUF4942 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.SflSTLE1ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 5460 | 67 aa hypothetical protein | |||
| 5465 | M | M.Ecop10BORF17900P (100% identity) | M.SflSTLE1ORF5465P | |
| 5470 | phage holin, lambda family | |||
| 5610 | 257 aa hypothetical protein | |||
| 5615 | M | M.SflFF60ORF5825P (100% identity) | M.SflSTLE1ORF5615P | |
| 5620 | R | Sso8033ORF3755P (100% identity) | CCWGG | SflSTLE1ORF5615P |
| 5625 | 121 aa hypothetical protein | |||
| 8820 | 150 aa hypothetical protein | |||
| 8825 | M | M.SflN97ORF8920P (100% identity) | M.SflSTLE1ORF8825P | |
| 8830 | 63 aa hypothetical protein | |||
| 8940 | phosphohydrolase | |||
| 8945 | M | M.SflN97DcmP (100% identity) | CCWGG | M.SflSTLE1DcmP |
| 8950 | V | V.SflN97DcmP (100% identity) | V.SflSTLE1DcmP | |
| 8955 | drug/metabolite exporter YedA | |||