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Putative Escherichia coli A15 RM systems
Ref: Kang,Y. et al. Brief Bioinform 22 (4) (2021)
REBASE ref # 34039
Complete sequence: 4,818,521 bp
GenBank #: CP028759
REBASE acronym: EcoA15
Org_num: 56569
All begin AOY68_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3010 | 428 aa hypothetical protein | |||
3015 | S | S.SflFF71ORF17365P (52% identity) | S2.EcoA15ORF3025P | |
3020 | S | S.SflFF71ORF17365P (37% identity) | S1.EcoA15ORF3025P | |
3025 | M | M.EcoVCSW8ORF19350P (100% identity) | M.EcoA15ORF3025P | |
3030 | 128 aa hypothetical protein | |||
3270 | endoribonuclease SymE | |||
??? | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.EcoA15I |
3285 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.EcoA15I |
3290 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | EcoA15IP |
3295 | 322 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
9330 | recombination protein NinB | |||
9335 | M | M.EcoACNORF2457P (99% identity) | GATC | M.EcoA15ORF9335P |
9340 | NinE family protein | |||
14550 | drug/metabolite exporter YedA | |||
14555 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoA15DcmP |
14560 | M | M.EcoVCSW8DcmP (100% identity) | CCWGG | M.EcoA15Dcm |
14565 | phosphohydrolase | |||
22000 | Fis family transcriptional regulator | |||
22005 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoA15ORF22005P |
22010 | DUF2556 domain-containing protein | |||
22560 | ribulose-phosphate 3-epimerase | |||
22565 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoA15DamP |
22570 | protein DamX | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
3260 | DUF1127 domain-containing protein | |||
3265 | R | SflWW1GmrSDP (100% identity) | EcoA15GmrSDP | |
3270 | endoribonuclease SymE |