Pseudomonas putida LWPZF |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas putida LWPZF RM systems
Ref: Jin,T. unpublished
REBASE ref # 33794
| Sequence length: | GenBank #: | |
| Chromosome: | 6,259,530 bp | CP069080 |
| plasmid pLWPZF: | 160,969 bp | CP069081 |
REBASE acronym: PpuPZF
Org_num: 55419
All begin JNO42_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18000 | AAA family ATPase | |||
| 18005 | S | S.PpuT1EORF672P (99% identity) | S.PpuPZFORF18010P | |
| 18010 | M | M.Ppu1EORF22560P (99% identity) | M.PpuPZFORF18010P | |
| 18015 | HsdR family type I site-specific | |||
| 18010 | SAM-dependent DNA methyltransferase | |||
| 18015 | R | Ppu1EORF22575P (99% identity) | PpuPZFORF18025P | |
| 18020 | S | S.PpuT1EORF676P (100% identity) | S.PpuPZFORF18025P | |
| 18025 | M | M2.PpuT1EORF676P (99% identity) | M2.PpuPZFORF18025P | |
| 18030 | M | M1.PpuT1EORF676P (99% identity) | M1.PpuPZFORF18025P | |
| 18035 | IS66 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3780 | lysis protein | |||
| 3785 | M | M.PplNZBD9ORFAP (95% identity) | M.PpuPZFORF3785P | |
| 3790 | AAA family ATPase | |||
| 8645 | 71 aa hypothetical protein | |||
| 8650 | M | M.Ppu8038ORFAP (96% identity) | M.PpuPZFORF8650P | |
| 8655 | lysis protein | |||
| plasmid pLWPZF | ||||
| 29055 | 76 aa hypothetical protein | |||
| 29060 | M | M.Psp11382ORF28625P (100% identity) | M.PpuPZFORF29060P | |
| 29065 | recombination-associated protein RdgC | |||