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Putative Citrobacter portucalensis SWHIN_111 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Sequence length: | GenBank #: | |
Chromosome: | 5,053,144 bp | CP055089 |
plasmid unnamed1: | 126,719 bp | CP055090 |
plasmid unnamed2: | 80,984 bp | CP055091 |
REBASE acronym: Cpo111
Org_num: 55389
All begin HUZ88_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
17610 | transposase | |||
17615 | M | M.Eko50119ORF5695P (100% identity) | TTCANNNNNNTCG | M.Cpo111ORF17615P |
17620 | S | S.Rpl430I (100% identity) | TTCANNNNNNTCG | S.Cpo111ORF17615P |
17625 | R | Rpl430IP (100% identity) | TTCANNNNNNTCG | Cpo111ORF17615P |
17630 | 197 aa hypothetical protein | |||
plasmid unnamed2 | ||||
25150 | 69 aa hypothetical protein | |||
25155 | M | M.Ror2015ORFEP (99% identity) | GAGNNNNNNCGT | M.Cpo111ORF25155P |
25160 | S | S.Kpns9645I (100% identity) | GAGNNNNNNCGT | S.Cpo111ORF25155P |
25165 | R | Kpns9645IP (99% identity) | GAGNNNNNNCGT | Cpo111ORF25155P |
25170 | ISL3 family transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1650 | cell division protein DamX | |||
1655 | M | M.CspMGH105DamP (100% identity) | GATC | M.Cpo111DamP |
1660 | ribulose-phosphate 3-epimerase | |||
3120 | HNH endonuclease | |||
3125 | R | CfrC07ORF19470P (99% identity) | Cpo111ORF3125P | |
3130 | FAD-dependent oxidoreductase | |||
14005 | drug/metabolite exporter YedA | |||
14010 | V | V.CyoL6ORF9385P (100% identity) | V.Cpo111ORF14015P | |
14015 | M | M.CspMGH105ORFGP (99% identity) | CCWGG | M.Cpo111ORF14015P |
14020 | phosphohydrolase | |||
17730 | SIR2 family protein | |||
17735 | R | CpoC275ORFBP (100% identity) | C | Cpo111ORF17735P |
17740 | 118 aa hypothetical protein | |||
21800 | tyrosine-type recombinase/integrase | |||
21805 | M | M.Cpo4hyORF2320P (100% identity) | ATGCAT | M.Cpo111ORF21805P |
21810 | DUF2556 family protein | |||
plasmid unnamed1 | ||||
24865 | tyrosine-type recombinase/integrase | |||
24870 | R | Kpn9645ORFAP (100% identity) | CCWGG | Cpo111ORF24875P |
24875 | M | M.Kpn3892ORF26955P (100% identity) | CCWGG | M.Cpo111ORF24875P |
24880 | AAA family ATPase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
23205 | 59 aa hypothetical protein | |||
23210 | M | M.SenK61ORFCP (99% identity) | M.Cpo111ORF23210P | |
23215 | 70 aa hypothetical protein |