Shigella flexneri SWHIN_97 |
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Putative Shigella flexneri SWHIN_97 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,714,768 bp
GenBank #: CP055070
REBASE acronym: SflN97
Org_num: 55459
All begin HUZ91_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14055 | GTPase family protein | |||
| 14060 | M | M.Efe1521ORF24640P (100% identity) | M.SflN97ORF14060P | |
| 14065 | S | S.SflFF34ORF9300P (100% identity) | S.SflN97ORF14060P | |
| 14070 | R | EcoJH51ORF14635P (100% identity) | SflN97ORF14060P | |
| 14075 | IS1 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1630 | cell division protein DamX | |||
| 1635 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflN97DamP |
| 1640 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.SflN97ORF2250P |
| 2255 | tyrosine-type recombinase/integrase | |||
| 8915 | 150 aa hypothetical protein | |||
| 8920 | M | M.SflSTLE1ORF8825P (100% identity) | M.SflN97ORF8920P | |
| 8925 | 63 aa hypothetical protein | |||
| 9020 | phosphohydrolase | |||
| 9025 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.SflN97DcmP |
| 9030 | V | V.SflSTLE1DcmP (100% identity) | V.SflN97DcmP | |
| 9035 | drug/metabolite exporter YedA | |||
| 15805 | NinE family protein | |||
| 15810 | M | M.SflN116ORF8655P (100% identity) | GATC | M.SflN97ORF15810P |
| 15815 | recombination protein NinB | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14235 | IS5 family transposase | |||
| 14240 | R | Kpn0718McrCP (100% identity) | SflN97McrCP | |
| 14245 | R | Efe1521McrBP (100% identity) | SflN97McrBP | |
| 14250 | 141 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8420 | recombination protein NinB | |||
| 8425 | M | M.SflFF12ORF23260P (100% identity) | GATC | M.SflN97ORF8425P |
| 8430 | NinE family protein | |||