Shigella dysenteriae SWHE2 |
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Putative Shigella dysenteriae SWHE2 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 4,977,071 bp | CP055063 |
| plasmid unnamed1: | 315,105 bp | CP055064 |
REBASE acronym: SdySWHE2
Org_num: 55435
All begin HUZ65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4280 | endoribonuclease SymE | |||
| 4285 | R | Eco936ORF20280P (100% identity) | SdySWHE2ORF4295P | |
| ??? | S | S.Eco00570ORF12425P (100% identity) | S.SdySWHE2ORF4295P | |
| 4295 | M | M.EcoGF33ORF19005P (99% identity) | M.SdySWHE2ORF4295P | |
| 4300 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4085 | 100 aa hypothetical protein | |||
| 4090 | R | EcoVCSW7ORF19480P (100% identity) | SdySWHE2ORF4090P | |
| 4095 | HNH endonuclease | |||
| 15390 | drug/metabolite exporter YedA | |||
| 15395 | V | V.SdyFF51DcmP (100% identity) | V.SdySWHE2DcmP | |
| 15400 | M | M.SdyFF51DcmP (100% identity) | CCWGG | M.SdySWHE2DcmP |
| 15405 | phosphohydrolase | |||
| 22085 | DNA-binding transcriptional regulator Fis | |||
| 22090 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.SdySWHE2ORF22090P |
| 22095 | DUF2556 family protein | |||
| 22600 | ribulose-phosphate 3-epimerase | |||
| 22605 | M | M.SspPIBDamP (100% identity) | GATC | M.SdySWHE2DamP |
| 22610 | cell division protein DamX | |||
| plasmid unnamed1 | ||||
| 23400 | 55 aa hypothetical protein | |||
| 23405 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.SdySWHE2ORF23405P |
| 23410 | thermonuclease family protein | |||
| 24225 | 277 aa hypothetical protein | |||
| 24230 | M | M.YpsF1ORFDP (100% identity) | GATC | M.SdySWHE2ORF24230P |
| 24235 | DNA-binding protein | |||
| 24370 | 202 aa hypothetical protein | |||
| 24375 | M | M.YpsF1ORFBP (100% identity) | M.SdySWHE2ORF24375P | |
| 24380 | 48 aa hypothetical protein | |||