Shigella flexneri SWHEFF_60 |
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Putative Shigella flexneri SWHEFF_60 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 4,728,650 bp | CP055037 |
| plasmid unnamed1: | 140,589 bp | CP055038 |
REBASE acronym: SflFF60
Org_num: 55450
All begin HUZ72_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1640 | cell division protein DamX | |||
| 1645 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflFF60DamP |
| 1650 | ribulose-phosphate 3-epimerase | |||
| 2265 | DUF2556 family protein | |||
| 2270 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.SflFF60ORF2270P |
| 2275 | DNA-binding transcriptional regulator Fis | |||
| 3935 | DEAD/DEAH box helicase | |||
| 3940 | RM | EcoPF16ORF4240P (98% identity) | SflFF60ORF3940P | |
| 5650 | 67 aa hypothetical protein | |||
| 5655 | M | M.EcoO78ORF6265P (97% identity) | M.SflFF60ORF5655P | |
| 5660 | 63 aa hypothetical protein | |||
| 5820 | 257 aa hypothetical protein | |||
| 5825 | M | M.SflSTLE1ORF5615P (100% identity) | M.SflFF60ORF5825P | |
| 5830 | R | Sso8033ORF3755P (100% identity) | CCWGG | SflFF60ORF5825P |
| 5835 | 121 aa hypothetical protein | |||
| 9165 | phosphohydrolase | |||
| 9170 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.SflFF60DcmP |
| 9175 | V | V.SflSTLE1DcmP (100% identity) | V.SflFF60DcmP | |
| 9180 | drug/metabolite exporter YedA | |||
| 15125 | replication endonuclease | |||
| 15130 | M | M.SspS13ORF8710P (100% identity) | GATC | M.SflFF60ORF15130P |
| 15135 | TraR/DksA family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 23535 | 73 aa hypothetical protein | |||
| 23540 | M | M.SmaQC11ORF52800P (100% identity) | M.SflFF60ORF23540P | |
| 23545 | 76 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5610 | PerC family transcriptional regulator | |||
| 5615 | M | M.Eco2351ORF10P (100% identity) | GATC | M.SflFF60ORF5615P |
| 5620 | LexA family transcriptional regulator | |||