Shigella flexneri SWHEFF_64 |
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Putative Shigella flexneri SWHEFF_64 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,707,466 bp
GenBank #: CP055030
REBASE acronym: SflFF64
Org_num: 55451
All begin HUZ74_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5385 | transposase | |||
| 5390 | R | SflSTLE3ORF22785P (100% identity) | SflFF64ORF5405P | |
| 5395 | DUF4268 domain-containing protein | |||
| 5400 | S | S.EcoJ20ORF20075P (100% identity) | S.SflFF64ORF5405P | |
| 5405 | M | M.EcoJ20ORF20075P (100% identity) | M.SflFF64ORF5405P | |
| 5410 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1600 | cell division protein DamX | |||
| 1605 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflFF64DamP |
| 1610 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.SflFF64ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 9120 | phosphohydrolase | |||
| 9125 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.SflFF64DcmP |
| 9130 | V | V.SflFF22DcmP (100% identity) | CCWGG | V.SflFF64DcmP |
| 9135 | drug/metabolite exporter YedA | |||
| 19850 | IS5-like element ISKpn26 family transposase | |||
| 19855 | R | EcoVA2ORFGP (100% identity) | GAAC | SflFF64ORF19855P |
| 19860 | integrase arm-type DNA-binding domain-containing | |||