Shigella flexneri SWHEFF_71 |
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Putative Shigella flexneri SWHEFF_71 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
| Sequence length: | GenBank #: | |
| Chromosome: | 4,940,262 bp | CP055015 |
| plasmid unnamed1: | 183,928 bp | CP055016 |
REBASE acronym: SflFF71
Org_num: 55453
All begin HUZ78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17355 | 428 aa hypothetical protein | |||
| 17360 | S | S.EcoVCSW8ORF19350P (100% identity) | TGHAYNNNNCTNC | S.SflFF71ORF17365P |
| 17365 | M | M.EcoTrh52ORF17850P (100% identity) | TGHAYNNNNCTNC | M.SflFF71ORF17365P |
| 17370 | 128 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 895 | 79 aa hypothetical protein | |||
| 900 | M | M.EcoS016ORF5750P (100% identity) | A | M.SflFF71ORF900P |
| 920 | DUF1737 domain-containing protein | |||
| 4770 | drug/metabolite exporter YedA | |||
| 4775 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.SflFF71DcmP |
| 4780 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.SflFF71DcmP |
| 4785 | phosphohydrolase | |||
| 12175 | DNA-binding transcriptional regulator Fis | |||
| 12180 | M | M.EcotcmA3ORF12410P (99% identity) | ATGCAT | M.SflFF71ORF12180P |
| 12185 | DUF2556 family protein | |||
| 12730 | ribulose-phosphate 3-epimerase | |||
| 12735 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflFF71DamP |
| 12740 | cell division protein DamX | |||
| 17380 | AAA family ATPase | |||
| 17385 | R | EcosHSORF19040P (100% identity) | SflFF71ORF17385P | |
| 17390 | HNH endonuclease | |||
| plasmid unnamed1 | ||||
| 24440 | 55 aa hypothetical protein | |||
| 24445 | M | M.YpsF1ORFCP (46% identity) | M.SflFF71ORF24445P | |
| 24450 | 77 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17370 | 128 aa hypothetical protein | |||
| 17375 | R | EcoSTEC308McrCP (100% identity) | SflFF71McrCP | |
| 17380 | R | SflN101McrBP (100% identity) | SflFF71McrBP | |
| 17385 | HNH endonuclease | |||