Klebsiella pneumoniae STIN_88 |
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Putative Klebsiella pneumoniae STIN_88 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 5,230,518 bp
GenBank #: CP054990
REBASE acronym: KpnFF88
Org_num: 55402
All begin HUZ58_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5280 | AAA family ATPase | |||
| 5285 | R | KpnLZORFEP (100% identity) | AGCNNNNNNNTCAC | KpnFF88ORF5295P |
| 5290 | S | S.KpnLZORFEP (100% identity) | AGCNNNNNNNTCAC | S.KpnFF88ORF5295P |
| 5295 | M | M.KpnLZORFEP (93% identity) | AGCNNNNNNNTCAC | M.KpnFF88ORF5295P |
| 5300 | DNA helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 530 | ribulose-phosphate 3-epimerase | |||
| 535 | M | M.KspC31DamP (100% identity) | GATC | M.KpnFF88DamP |
| 540 | cell division protein DamX | |||
| 5320 | DUF2778 domain-containing protein | |||
| 5325 | R | Kva907ORF145P (99% identity) | KpnFF88ORF5325P | |
| 5330 | HNH endonuclease | |||
| 13290 | 81 aa hypothetical protein | |||
| 13295 | M | M.KpnS1314ORF20870P (99% identity) | M.KpnFF88ORF13295P | |
| 13300 | DinI-like family protein | |||
| 19450 | drug/metabolite exporter YedA | |||
| 19455 | V | V.Ksp2N3ORFEP (75% identity) | CCWGG | V.KpnFF88DcmP |
| 19460 | M | M.KpnSYCC61DcmP (100% identity) | CCWGG | M.KpnFF88DcmP |
| 19465 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5270 | 100 aa hypothetical protein | |||
| 5275 | R | KpnLZMcrCP (99% identity) | KpnFF88McrCP | |
| 5280 | R | KpnLZMcrBP (100% identity) | KpnFF88McrBP | |
| 5285 | type I restriction endonuclease subunit R | |||