Shigella flexneri STEFF_22 |
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Putative Shigella flexneri STEFF_22 RM systems
Ref: Che,Y. et al. Microbiome 10 (1), 16 (2022)
REBASE ref # 33791
Complete sequence: 4,816,770 bp
GenBank #: CP055170
REBASE acronym: SflFF22
Org_num: 55443
All begin HUZ49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2055 | NADPH-dependent aldehyde reductase Ahr | |||
| 2065 | R | EcoY2019ORF11335P (100% identity) | GACNNNNNNRTAAY | SflFF22ORF2075P |
| 2070 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.SflFF22ORF2075P |
| 2075 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.SflFF22ORF2075P |
| 2080 | DUF4942 domain-containing protein | |||
| 18400 | GTPase family protein | |||
| 18405 | M | M.EcoB379ORF5755P (99% identity) | M.SflFF22ORF18405P | |
| 18410 | S | S.EcoO111ORFAP (67% identity) | S.SflFF22ORF18405P | |
| 18415 | R | Sfl877IIP (99% identity) | SflFF22ORF18405P | |
| 18420 | transposase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5 | replication endonuclease | |||
| 10 | M | M.Eho218ORF15P (100% identity) | GTCGAC | M.SflFF22ORF10P |
| 15 | R | Eho218ORF15P (99% identity) | GTCGAC | SflFF22ORF10P |
| 20 | phage portal protein | |||
| 4240 | PerC family transcriptional regulator | |||
| 4245 | M | M.EcoC9964ORF1173P (100% identity) | GATC | M.SflFF22ORF4245P |
| 4250 | LexA family transcriptional regulator | |||
| 12435 | drug/metabolite exporter YedA | |||
| 12440 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.SflFF22DcmP |
| 12445 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.SflFF22DcmP |
| 12450 | phosphohydrolase | |||
| 15400 | DEAD/DEAH box helicase | |||
| 15405 | RM | Eco4A1ORF6565P (100% identity) | SflFF22ORF15405P | |
| 15410 | HigA family addiction module antidote protein | |||
| 19510 | DNA-binding transcriptional regulator Fis | |||
| 19515 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.SflFF22ORF19515P |
| 19520 | DUF2556 family protein | |||
| 20040 | ribulose-phosphate 3-epimerase | |||
| 20045 | M | M.UbaC1152DamP (100% identity) | GATC | M.SflFF22DamP |
| 20050 | cell division protein DamX | |||