Escherichia coli NEC16 |
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Putative Escherichia coli NEC16 RM systems
Ref: Kumar,N.R. et al. unpublished
REBASE ref # 33393
Complete sequence: 4,963,880 bp
GenBank #: CP091167
REBASE acronym: EcoNEC16
Org_num: 53828
All begin L2W41_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23180 | endoribonuclease SymE | |||
| 23185 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoNEC16ORF23190P |
| 23190 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoNEC16ORF23190P |
| 23195 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoNEC16ORF23190P |
| 23200 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6060 | recombination protein NinB | |||
| 6065 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoNEC16ORF6065P |
| 6070 | NinE family protein | |||
| 10300 | drug/metabolite exporter YedA | |||
| 10305 | V | V.Ecostr9DcmP (74% identity) | CCWGG | V.EcoNEC16DcmP |
| 10310 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.EcoNEC16DcmP |
| 10315 | phosphohydrolase | |||
| 13225 | PerC family transcriptional regulator | |||
| 13230 | M | M.EcoPK8275ORF9875P (100% identity) | M.EcoNEC16ORF13230P | |
| 13235 | serine/threonine protein phosphatase | |||
| 17380 | DNA-binding transcriptional regulator Fis | |||
| 17385 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoNEC16ORF17385P |
| 17390 | DUF2556 family protein | |||
| 17875 | ribulose-phosphate 3-epimerase | |||
| 17880 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoNEC16DamP |
| 17885 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23195 | type I restriction-modification system | |||
| 23200 | R | EcosS1MrrP (100% identity) | EcoNEC16MrrP | |
| 23205 | GTPase | |||