Pseudomonas savastanoi pv. savastanoi PVFi1 |
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Putative Pseudomonas savastanoi pv. savastanoi PVFi1 RM systems
Ref: Turco,S. et al. Environ Microbiol Rep (2022) In press
REBASE ref # 33714
Complete sequence: 6,253,686 bp
GenBank #: CP078139
REBASE acronym: PsaPVFi1a
Org_num: 55024
All begin HQ966_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8135 | FxLYD domain-containing protein | |||
| 8140 | R | PsasM2IP (100% identity) | CTGCAG | PsaPVFi1aORF8145P |
| 8145 | M | M.PsasM2I (100% identity) | CTGCAG | M.PsaPVFi1aORF8145P |
| 8150 | DUF4113 domain-containing protein | |||
| 13205 | 288 aa hypothetical protein | |||
| 13210 | M | M.Psy107ORFAP (100% identity) | M.PsaPVFi1aORF13210P | |
| 13215 | 104 aa hypothetical protein | |||
| 13540 | 72 aa hypothetical protein | |||
| 13545 | M | M.Psy107ORFBP (87% identity) | M.PsaPVFi1aORF13545P | |
| 13550 | DUF2514 domain-containing protein | |||
| 13805 | 62 aa hypothetical protein | |||
| 13810 | M | M.Psy107ORFCP (100% identity) | M.PsaPVFi1aORF13810P | |
| 13815 | 179 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20235 | IS3-like element IS51 family transposase | |||
| 20240 | R | Psy107McrCP (81% identity) | PsaPVFi1aMcrCP | |
| 20245 | R | Psy107McrBP (100% identity) | PsaPVFi1aMcrBP | |
| 20250 | Bro-N domain-containing protein | |||