Escherichia coli 788309 |
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Putative Escherichia coli 788309 RM systems
Ref: Bird,M.T. et al. unpublished
REBASE ref # 33359
| Sequence length: | GenBank #: | |
| Chromosome: | 5,173,954 bp | CP091391 |
| plasmid p788309_1: | 86,653 bp | CP091392 |
| plasmid p788309_2: | 111,373 bp | CP091393 |
REBASE acronym: Eco788309
Org_num: 53573
All begin K2839_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3560 | 237 aa hypothetical protein | |||
| 3565 | R | Ecos135ORF4680P (98% identity) | Eco788309ORF3575P | |
| 3570 | S | S.Ecos135ORF4680P (99% identity) | S.Eco788309ORF3575P | |
| 3575 | M | M.Ecos135ORF4680P (99% identity) | M.Eco788309ORF3575P | |
| 3580 | DUF262 domain-containing protein | |||
| plasmid p788309_2 | ||||
| 25410 | 158 aa hypothetical protein | |||
| 25415 | R | EcoMY18ORF24050P (100% identity) | GAANNNNNNTAYG | Eco788309ORF25425P |
| 25420 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.Eco788309ORF25425P |
| 25425 | M | M.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | M.Eco788309ORF25425P |
| 25430 | DNA polymerase III subunit theta | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3300 | peptidase | |||
| 3305 | R | EcoSC418ORFBP (100% identity) | Eco788309ORF3305P | |
| 3310 | HNH endonuclease | |||
| 3350 | DEAD/DEAH box helicase | |||
| 3355 | RM | Eco62ORF11520P (100% identity) | Eco788309ORF3355P | |
| 11195 | TrmB family transcriptional regulator | |||
| 11200 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco788309ORF11200P |
| 11220 | DUF3927 family protein | |||
| 15090 | drug/metabolite exporter YedA | |||
| 15095 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco788309DcmP |
| 15100 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco788309DcmP |
| 15105 | phosphohydrolase | |||
| 22355 | DNA-binding transcriptional regulator Fis | |||
| 22360 | M | M.Ecoi68ORF2692P (100% identity) | ATGCAT | M.Eco788309ORF22360P |
| 22365 | DUF2556 family protein | |||
| 22885 | ribulose-phosphate 3-epimerase | |||
| 22890 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco788309DamP |
| 22895 | cell division protein DamX | |||
| plasmid p788309_1 | ||||
| 25230 | 76 aa hypothetical protein | |||
| 25235 | M | M.Sen4346ORF22715P (91% identity) | M.Eco788309ORF25235P | |
| 25240 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20305 | S8 family peptidase | |||
| 20310 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco788309ORF20310P |
| 20315 | R | EcoI121ORF10595P (100% identity) | ACCACC | Eco788309ORF20310P |
| 20320 | 97 aa hypothetical protein | |||