Streptococcus suis LSM29 |
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Putative Streptococcus suis LSM29 RM systems
Ref: Li,J. unpublished
REBASE ref # 26485
Complete sequence: 2,157,789 bp
GenBank #: CP091423
REBASE acronym: SsuLSM29
Org_num: 55842
All begin L3X15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6200 | 310 aa hypothetical protein | |||
| 6205 | S | S.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | S.SsuLSM29ORF6210P |
| 6210 | M | M.SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | M.SsuLSM29ORF6210P |
| 6215 | R | SsuiS10ORFCP (100% identity) | CCAANNNNNNTTC | SsuLSM29ORF6210P |
| 6220 | FAD-containing oxidoreductase | |||
| 6960 | ribose-5-phosphate isomerase RpiA | |||
| 6965 | S | S2.SsuLSM157ORF6695P (100% identity) | S2.SsuLSM29ORF6975P | |
| 6970 | S | S2.SsuiS10ORFBP (100% identity) | CCAANNNNNNTTC | S1.SsuLSM29ORF6975P |
| 6975 | M | M.SsuiS10ORFBP (100% identity) | M.SsuLSM29ORF6975P | |
| 6980 | R | SsuiS10ORFBP (100% identity) | SsuLSM29ORF6975P | |
| 6985 | tRNA uridine-5-carboxymethylaminomethyl(34) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2930 | replication initiator protein A | |||
| 2935 | M | M.SsuLSM29ORF6900P (97% identity) | M.SsuLSM29ORF2935P | |
| 2940 | 142 aa hypothetical protein | |||
| 6895 | 142 aa hypothetical protein | |||
| 6900 | M | M.Seq0793ORF8930P (98% identity) | M.SsuLSM29ORF6900P | |
| 6905 | replication initiator protein A | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6255 | IS200/IS605 family transposase | |||
| 6260 | R | SsuiS10ORFEP (100% identity) | SsuLSM29ORF6265P | |
| 6265 | M | M.SsuLSM157ORF5900P (100% identity) | M.SsuLSM29ORF6265P | |
| 6270 | DUF3885 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5460 | glutamine-hydrolyzing GMP synthase | |||
| 5465 | R | Ssu13McrCP (99% identity) | SsuLSM29McrCP | |
| 5470 | R | SsuLSS42McrBP (99% identity) | SsuLSM29McrBP | |
| 5475 | 263 aa hypothetical protein | |||