Escherichia coli Ec394-330266 |
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Putative Escherichia coli Ec394-330266 RM systems
Ref: Tegelkamp,K. et al. unpublished
REBASE ref # 33382
| Sequence length: | GenBank #: | |
| Chromosome: | 5,068,795 bp | CP056114 |
| plasmid pEC394-330266_128: | 128,537 bp | CP056115 |
REBASE acronym: Eco330266
Org_num: 53769
All begin HWD38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16865 | endoribonuclease SymE | |||
| 16870 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | Eco330266ORF16880P |
| 16875 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.Eco330266ORF16880P |
| 16880 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.Eco330266ORF16880P |
| 16885 | restriction endonuclease | |||
| 18655 | ash family protein | |||
| 18660 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco330266ORF18665P |
| 18665 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco330266ORF18665P |
| 18670 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco330266ORF18665P |
| 18675 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10510 | DNA-binding transcriptional regulator Fis | |||
| 10515 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco330266ORF10515P |
| 10520 | DUF2556 family protein | |||
| 11110 | ribulose-phosphate 3-epimerase | |||
| 11115 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco330266DamP |
| 11120 | cell division protein DamX | |||
| 12610 | BREX system P-loop protein BrxC | |||
| 12615 | RM | EcosR9ORF15335P (100% identity) | CANCATC | Eco330266ORF12615P |
| 12620 | BREX-1 system phosphatase PglZ type A | |||
| 16525 | helix-turn-helix domain-containing protein | |||
| 16530 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco330266ORF16530P |
| 16535 | M | M2.EcosS9ORF2810P (99% identity) | GGTCTC | M2.Eco330266ORF16530P |
| 16540 | R | EcosS9ORF2810P (97% identity) | GGTCTC | Eco330266ORF16530P |
| 16545 | McrC family protein | |||
| 22125 | 72 aa hypothetical protein | |||
| 22130 | M | M.KpnYN1ORFGP (89% identity) | M.Eco330266ORF22130P | |
| 22135 | helix-turn-helix transcriptional regulator | |||
| 24360 | TrmB family transcriptional regulator | |||
| 24365 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco330266ORF24365P |
| 24380 | DUF3927 family protein | |||
| plasmid pEC394-330266_128 | ||||
| 24965 | 102 aa hypothetical protein | |||
| 24970 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco330266ORF24970P |
| 24975 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16540 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16545 | R | EcosS9McrCP (100% identity) | Eco330266McrCP | |
| 16550 | R | EcosS3McrBP (100% identity) | Eco330266McrBP | |
| 16555 | glycosyltransferase family 2 protein | |||