Escherichia coli 83972 |
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Putative Escherichia coli 83972 RM systems
Ref: Sproer,C. et al. unpublished
REBASE ref # 33365
Complete sequence: 5,131,295 bp
GenBank #: CP058220
REBASE acronym: Eco83972
Org_num: 53577
All begin HW371_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20720 | DUF262 domain-containing protein | |||
| 20725 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | Eco83972ORF20730P |
| 20730 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.Eco83972ORF20730P |
| 20735 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.Eco83972ORF20730P |
| 20740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2480 | DUF2556 family protein | |||
| 2485 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco83972ORF2485P |
| 2490 | DNA-binding transcriptional regulator Fis | |||
| 9520 | phosphohydrolase | |||
| 9525 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco83972DcmP |
| 9530 | V | V.EcosC25DcmP (100% identity) | CCWGG | V.Eco83972DcmP |
| 9535 | drug/metabolite exporter YedA | |||
| 11470 | 71 aa hypothetical protein | |||
| 11475 | M | M.EcoR50ORF11630P (100% identity) | M.Eco83972ORF11475P | |
| 11480 | helix-turn-helix domain-containing protein | |||
| 14745 | tellurite resistance protein | |||
| 14765 | M | M.SflC32ORFBP (100% identity) | M.Eco83972ORF14765P | |
| 14770 | TrmB family transcriptional regulator | |||
| 20885 | HNH endonuclease | |||
| 20890 | R | EcoT073ORF21650P (100% identity) | Eco83972ORF20890P | |
| 20895 | 109 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20930 | ATP-binding domain-containing protein | |||
| 20935 | M | M.EcoUTI89I (100% identity) | CACAG | M.Eco83972ORF20935P |
| 20940 | R | EcoUTI89IP (100% identity) | CACAG | Eco83972ORF20935P |
| 20945 | integrase arm-type DNA-binding domain-containing | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13670 | NinE family protein | |||
| 13675 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco83972ORF13675P |
| 13680 | recombination protein NinB | |||