Salmonella enterica subsp. enterica serovar Typhimurium NCCP16345 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCCP16345 RM systems
Ref: An,Y.W. et al. unpublished
REBASE ref # 33784
| Sequence length: | GenBank #: | |
| Chromosome: | 4,905,024 bp | CP068696 |
| plasmid unnamed: | 93,874 bp | CP068697 |
REBASE acronym: Sen16345
Org_num: 55345
All begin JKV46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22470 | restriction endonuclease | |||
| 22475 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen16345ORF22480P |
| 22480 | M | M.StyUK1II (100% identity) | GAGNNNNNNRTAYG | M.Sen16345ORF22480P |
| 22485 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen16345ORF22480P |
| 22490 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4200 | cell division protein DamX | |||
| 4205 | M | M.StyTDamP (100% identity) | GATC | M.Sen16345DamP |
| 4210 | ribulose-phosphate 3-epimerase | |||
| 4700 | DUF2556 family protein | |||
| 4705 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen16345ORF4705P |
| 4710 | DNA-binding transcriptional regulator Fis | |||
| 8010 | TraR/DksA family transcriptional regulator | |||
| 8015 | M | M.SspA39ORFGP (100% identity) | GATC | M.Sen16345ORF8015P |
| 8020 | replication endonuclease | |||
| 8540 | ead/Ea22-like family protein | |||
| 8545 | M | M.Sens29958ORF6205P (100% identity) | M.Sen16345ORF8545P | |
| 8550 | DUF550 domain-containing protein | |||
| 11830 | PerC family transcriptional regulator | |||
| 11835 | M | M.StyUK1V (100% identity) | GATC | M.Sen16345ORF11835P |
| 11840 | RusA family crossover junction | |||
| 12070 | phosphohydrolase | |||
| 12075 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen16345DcmP |
| 12080 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen16345DcmP |
| 12085 | drug/metabolite exporter YedA | |||
| 22630 | BREX system P-loop protein BrxC | |||
| 22635 | RM | SenWarORF11445P (100% identity) | GATCAG | Sen16345ORF22635P |
| 22640 | AAA family ATPase | |||
| plasmid unnamed | ||||
| 24335 | 118 aa hypothetical protein | |||
| 24340 | M | M.StyUK1ORFAP (100% identity) | M.Sen16345ORF24340P | |
| 24345 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20205 | 33 aa hypothetical protein | |||
| 20210 | R | StyUK1IP (99% identity) | CAGAG | Sen16345ORF20215P |
| 20215 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen16345ORF20215P |
| 20220 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22465 | BrnT family toxin | |||
| 22470 | R | StyUK1MrrP (100% identity) | Sen16345MrrP | |
| 22475 | type I restriction-modification system | |||