Pseudomonas aeruginosa NCCP15783 |
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Putative Pseudomonas aeruginosa NCCP15783 RM systems
Ref: An,Y.W. et al. unpublished
REBASE ref # 33389
Complete sequence: 6,941,174 bp
GenBank #: CP068678
REBASE acronym: Pae15783
Org_num: 54932
All begin JKV45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8185 | IS66 family insertion sequence hypothetical | |||
| 8190 | R | Pae85ORFFP (97% identity) | CYYANNNNNNCTGC | Pae15783ORF8200P |
| 8195 | DNA recombination protein RmuC | |||
| 8200 | M | M.Pfl10783I (100% identity) | CYYANNNNNNCTGC | M.Pae15783ORF8200P |
| 8205 | S | S.PaeLo552ORF23180P (99% identity) | CYYANNNNNNCTGC | S.Pae15783ORF8200P |
| 8210 | AAA family ATPase | |||
| 15215 | peptidase M15 | |||
| 15220 | M | M.PmeTTORFDP (95% identity) | M.Pae15783ORF15220P | |
| 15225 | S | S.Psp3919ORF16800P (54% identity) | S.Pae15783ORF15220P | |
| 15230 | AAA family ATPase | |||
| 15235 | McrC family protein | |||
| 15240 | R | Pae85ORFDP (98% identity) | Pae15783ORF15220P | |
| 15245 | helicase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1385 | helix-turn-helix transcriptional regulator | |||
| 1390 | M | M.Sdy11565ORF4813P (100% identity) | ACGGC | M.Pae15783ORF1390P |
| 1395 | transposase | |||
| 12220 | Arc family DNA-binding protein | |||
| 12225 | M | M.PaesA681ORF22140P (100% identity) | M.Pae15783ORF12225P | |
| 12230 | nucleoid-associated protein YejK | |||
| 16460 | Arc family DNA-binding protein | |||
| 16465 | M | M.PaesC79ORF28725P (100% identity) | M.Pae15783ORF16465P | |
| 16470 | nucleoid-associated protein YejK | |||
| 25850 | chromosome partitioning protein ParA | |||
| 25855 | RM | PaePA05ORF14460P (100% identity) | Pae15783ORF25855P | |
| 25860 | DEAD/DEAH box helicase | |||
| 26790 | 108 aa hypothetical protein | |||
| 26795 | M | M.PaeNA04ORF1590P (100% identity) | M.Pae15783ORF26795P | |
| 26800 | 164 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15225 | restriction endonuclease subunit S | |||
| 15230 | R | PmeTTMcrBP (55% identity) | Pae15783McrBP | |
| 15235 | R | PmeTTMcrCP (89% identity) | Pae15783McrCP | |
| 15240 | type I restriction endonuclease subunit R | |||