Escherichia coli 1162invT2 |
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Putative Escherichia coli 1162invT2 RM systems
Ref: Cevallos,M.A. et al. unpublished
REBASE ref # 33265
| Sequence length: | GenBank #: | |
| Chromosome: | 5,007,059 bp | CP051663 |
| plasmid pEco1162invT2b: | 157,396 bp | CP051665 |
REBASE acronym: EcoinvT2
Org_num: 53260
All begin HH200_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19040 | endoribonuclease SymE | |||
| 19045 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoinvT2ORF19055P |
| 19050 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoinvT2ORF19055P |
| 19055 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoinvT2ORF19055P |
| 19060 | restriction endonuclease | |||
| 20845 | ash family protein | |||
| 20850 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoinvT2ORF20855P |
| 20855 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoinvT2ORF20855P |
| 20860 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoinvT2ORF20855P |
| 20865 | 267 aa hypothetical protein | |||
| plasmid pEco1162invT2b | ||||
| 25080 | IS1 family transposase | |||
| 25085 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNNCTGG | EcoinvT2ORF25095P |
| 25090 | S | S.SenceORFJP (100% identity) | CAAYNNNNNNCTGG | S.EcoinvT2ORF25095P |
| 25095 | M | M.SenceORFJP (99% identity) | CAAYNNNNNNCTGG | M.EcoinvT2ORF25095P |
| 25100 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 405 | 71 aa hypothetical protein | |||
| 410 | M | M.KpnYN1ORFGP (89% identity) | M.EcoinvT2ORF410P | |
| 415 | helix-turn-helix transcriptional regulator | |||
| 2655 | TrmB family transcriptional regulator | |||
| 2660 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoinvT2ORF2660P |
| 2675 | DUF3927 family protein | |||
| 5890 | drug/metabolite exporter YedA | |||
| 5895 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoinvT2DcmP |
| 5900 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoinvT2DcmP |
| 5905 | phosphohydrolase | |||
| 12990 | DNA-binding transcriptional regulator Fis | |||
| 12995 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoinvT2ORF12995P |
| 13000 | DUF2556 family protein | |||
| 13590 | ribulose-phosphate 3-epimerase | |||
| 13595 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoinvT2DamP |
| 13600 | cell division protein DamX | |||
| 18695 | helix-turn-helix domain-containing protein | |||
| 18700 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoinvT2ORF18700P |
| 18705 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoinvT2ORF18700P |
| 18710 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoinvT2ORF18700P |
| 18715 | McrC family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18710 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 18715 | R | EcosS9McrCP (100% identity) | EcoinvT2McrCP | |
| 18720 | R | EcosS3McrBP (100% identity) | EcoinvT2McrBP | |
| 18725 | glycosyltransferase family 2 protein | |||