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Putative Salmonella enterica 2008079-SE RM systems
Ref: Bai,L. et al. unpublished
REBASE ref # 33757
Sequence length: | GenBank #: | |
Chromosome: | 4,976,978 bp | CP090529 |
plasmid p2008079-241: | 241,424 bp | CP090530 |
plasmid p3: | 93,407 bp | CP090532 |
REBASE acronym: Sen79SE
Org_num: 55136
All begin L0F60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20385 | restriction endonuclease | |||
20390 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen79SEORF20395P |
20395 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen79SEORF20395P |
20400 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen79SEORF20395P |
20405 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1805 | cell division protein DamX | |||
1810 | M | M.StyTDamP (100% identity) | GATC | M.Sen79SEDamP |
1815 | ribulose-phosphate 3-epimerase | |||
3220 | DUF2732 domain-containing protein | |||
3225 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen79SEORF3225P |
3230 | replication endonuclease | |||
5615 | IS6-like element IS26 family transposase | |||
5620 | M | M.StyCORF187P (49% identity) | M.Sen79SEORF5620P | |
5625 | thermonuclease family protein | |||
6320 | ead/Ea22-like family protein | |||
6325 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen79SEORF6325P |
6330 | DUF551 domain-containing protein | |||
9660 | PerC family transcriptional regulator | |||
9665 | M | M.SenPS1ORF9505P (100% identity) | M.Sen79SEORF9665P | |
9670 | RusA family crossover junction | |||
9915 | phosphohydrolase | |||
9920 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen79SEDcmP |
9925 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen79SEDcmP |
9930 | drug/metabolite exporter YedA | |||
20545 | BREX system P-loop protein BrxC | |||
20550 | RM | StyUK1IV (100% identity) | GATCAG | Sen79SEORF20550P |
20555 | AAA family ATPase | |||
plasmid p2008079-241 | ||||
24775 | 55 aa hypothetical protein | |||
24780 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen79SEORF24780P |
24785 | thermonuclease family protein | |||
25430 | 48 aa hypothetical protein | |||
25435 | M | M.YpsF1ORFBP (100% identity) | M.Sen79SEORF25435P | |
25440 | 202 aa hypothetical protein | |||
25550 | DNA-binding protein | |||
25555 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen79SEORF25555P |
25560 | 277 aa hypothetical protein | |||
plasmid p3 | ||||
25910 | 73 aa hypothetical protein | |||
25915 | M | M.SspPIBORF23080P (100% identity) | M.Sen79SEORF25915P | |
25920 | 103 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18080 | small effector SsaA | |||
18085 | R | StyUK1IP (99% identity) | CAGAG | Sen79SEORF18090P |
18090 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen79SEORF18090P |
18095 | MFS transporter | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
20380 | BrnT family toxin | |||
20385 | R | StyUK1MrrP (100% identity) | Sen79SEMrrP | |
20390 | type I restriction-modification system |