Escherichia coli STEC413 |
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Putative Escherichia coli STEC413 RM systems
Ref: Yanyu,P. unpublished
REBASE ref # 33408
Complete sequence: 4,860,939 bp
GenBank #: CP060105
REBASE acronym: EcoSTEC413
Org_num: 53914
All begin H6S21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5075 | 533 aa hypothetical protein | |||
| 5080 | M | M.EcoSTEC173ORF20415P (100% identity) | M.EcoSTEC413ORF5080P | |
| 5085 | S | S.EcoSTEC174ORF9155P (100% identity) | S.EcoSTEC413ORF5080P | |
| 5090 | R | EcoSTEC174ORF9155P (100% identity) | EcoSTEC413ORF5080P | |
| 5095 | 134 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4245 | 500 aa hypothetical protein | |||
| 4250 | M | M.EcoSTEC1025ORF20635P (100% identity) | ACCTGC | M.EcoSTEC413ORF4250P |
| 4255 | ISL3 family transposase | |||
| 4255 | ISL3 family transposase | |||
| 4260 | R | Eco4074ORF21875P (100% identity) | GAAC | EcoSTEC413ORF4260P |
| 4265 | integrase | |||
| 7095 | 257 aa hypothetical protein | |||
| 7100 | M | M.Eco1436ORF18605P (100% identity) | M.EcoSTEC413ORF7100P | |
| 7105 | R | Eco1436ORF18605P (100% identity) | EcoSTEC413ORF7100P | |
| 7110 | 379 aa hypothetical protein | |||
| 8560 | TrmB family transcriptional regulator | |||
| 8565 | M | M.EcoSTEC383ORFFP (100% identity) | M.EcoSTEC413ORF8565P | |
| 8570 | phage holin, lambda family | |||
| 12420 | TrmB family transcriptional regulator | |||
| 12425 | M | M.EcoSTEC383ORFCP (100% identity) | M.EcoSTEC413ORF12425P | |
| 12445 | Shiga toxin Stx2 subunit A | |||
| 15800 | drug/metabolite exporter YedA | |||
| 15805 | V | V.SflFF59DcmP (100% identity) | CCWGG | V.EcoSTEC413DcmP |
| 15810 | M | M.SflFF59DcmP (100% identity) | CCWGG | M.EcoSTEC413DcmP |
| 15815 | phosphohydrolase | |||
| 22665 | DNA-binding transcriptional regulator Fis | |||
| 22670 | M | M.EcoSTEC383ORFAP (100% identity) | ATGCAT | M.EcoSTEC413ORF22670P |
| 22675 | DUF2556 family protein | |||