Escherichia coli STEC639 |
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Putative Escherichia coli STEC639 RM systems
Ref: Pan,Y. et al. unpublished
REBASE ref # 33407
| Sequence length: | GenBank #: | |
| Chromosome: | 4,338,142 bp | CP061232 |
| plasmid pSTEC639_2: | 223,629 bp | CP061234 |
| plasmid pSTEC639_5: | 60,609 bp | CP061237 |
REBASE acronym: EcoSTEC639
Org_num: 53921
All begin H6S28_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16070 | toprim domain-containing protein | |||
| 16075 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoSTEC639ORF16085P |
| 16080 | S | S.EcoCI5I (99% identity) | GACNNNNNNRTAAY | S.EcoSTEC639ORF16085P |
| 16085 | M | M.Ror5ORF14185P (91% identity) | GACNNNNNNRTAAY | M.EcoSTEC639ORF16085P |
| 16090 | DUF4942 domain-containing protein | |||
| 18000 | Rpn family recombination-promoting | |||
| 18005 | M | M.Sen8497ORF2259P (100% identity) | M.EcoSTEC639ORF18005P | |
| 18010 | EF-P beta-lysylation protein EpmB | |||
| 18245 | M48 family metallopeptidase | |||
| 18250 | R | EcoFHI98ORFAP (100% identity) | EcoSTEC639ORF18270P | |
| 18255 | macro domain-containing protein | |||
| 18260 | DUF4433 domain-containing protein | |||
| 18265 | S | S.EcoC311ORF18910P (100% identity) | S.EcoSTEC639ORF18270P | |
| 18270 | M | M.EcoFHI98ORFAP (100% identity) | M.EcoSTEC639ORF18270P | |
| 18275 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 110 | M15 family metallopeptidase | |||
| 115 | M | M.Eco1317ORF6705P (97% identity) | M.EcoSTEC639ORF115P | |
| 120 | holin | |||
| 1540 | TrmB family transcriptional regulator | |||
| 1545 | M | M.EcoSTEC405ORF9980P (100% identity) | M.EcoSTEC639ORF1545P | |
| 1565 | SAM-dependent DNA methyltransferase | |||
| 4120 | protein ninF | |||
| 4125 | M | M.Ecos15955ORF20860P (100% identity) | M.EcoSTEC639ORF4125P | |
| 4130 | NinE family protein | |||
| 6075 | drug/metabolite exporter YedA | |||
| 6080 | V | V.EcosPA11DcmP (100% identity) | V.EcoSTEC639DcmP | |
| 6085 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.EcoSTEC639DcmP |
| 6090 | phosphohydrolase | |||
| 9625 | VRR-NUC domain-containing protein | |||
| 9630 | M | M.EcoDEC11DORF3038P (100% identity) | M.EcoSTEC639ORF9630P | |
| 9635 | 309 aa hypothetical protein | |||
| 14220 | DNA-binding transcriptional regulator Fis | |||
| 14225 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoSTEC639ORF14225P |
| 14230 | DUF2556 family protein | |||
| 14775 | ribulose-phosphate 3-epimerase | |||
| 14780 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSTEC639DamP |
| 14785 | cell division protein DamX | |||
| plasmid pSTEC639_2 | ||||
| 26565 | zinc finger-like domain-containing protein | |||
| 26570 | M | M.YpsF1ORFDP (100% identity) | GATC | M.EcoSTEC639ORF26570P |
| 26575 | DNA-binding protein | |||
| 26675 | 202 aa hypothetical protein | |||
| 26680 | M | M.YpsF1ORFBP (100% identity) | M.EcoSTEC639ORF26680P | |
| 26685 | 48 aa hypothetical protein | |||
| 27230 | thermonuclease family protein | |||
| 27235 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.EcoSTEC639ORF27235P |
| 27240 | 55 aa hypothetical protein | |||
| plasmid pSTEC639_5 | ||||
| 28205 | DUF1380 domain-containing protein | |||
| 28210 | M | M.Kpn5057ORF5351P (83% identity) | M.EcoSTEC639ORF28210P | |
| 28215 | 103 aa hypothetical protein | |||