Salmonella enterica subsp. enterica serovar Typhimurium ZJUJY |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium ZJUJY RM systems
Ref: Wang,Z. unpublished
REBASE ref # 27587
Complete sequence: 4,857,450 bp
GenBank #: CP090304
REBASE acronym: SenZJUJY
Org_num: 55365
All begin LPC12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 23155 | endoribonuclease SymE | |||
| 23160 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenZJUJYORF23165P |
| 23165 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.SenZJUJYORF23165P |
| 23170 | R | StyLT2IIP (100% identity) | GAGNNNNNNRTAYG | SenZJUJYORF23165P |
| 23175 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10260 | drug/metabolite exporter YedA | |||
| 10265 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.SenZJUJYDcmP |
| 10270 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.SenZJUJYDcmP |
| 10275 | phosphohydrolase | |||
| 17405 | DNA-binding transcriptional regulator Fis | |||
| 17410 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenZJUJYORF17410P |
| 17415 | DUF2556 family protein | |||
| 17900 | ribulose-phosphate 3-epimerase | |||
| 17905 | M | M.StyTDamP (100% identity) | GATC | M.SenZJUJYDamP |
| 17910 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1805 | MFS transporter | |||
| 1810 | M | M.StyUK1I (100% identity) | CAGAG | M.SenZJUJYORF1810P |
| 1815 | R | StyUK1IP (99% identity) | CAGAG | SenZJUJYORF1810P |
| 1820 | small effector SsaA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 23170 | type I restriction-modification system | |||
| 23175 | R | StyUK1MrrP (100% identity) | SenZJUJYMrrP | |
| 23180 | BrnT family toxin | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14085 | replication endonuclease | |||
| 14090 | M | M.StyLTORF13745P (100% identity) | GATC | M.SenZJUJYORF14090P |
| 14095 | TraR/DksA family transcriptional regulator | |||