Escherichia coli O25:H4 CU568-3 |
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Putative Escherichia coli O25:H4 CU568-3 RM systems
Ref: Wang,J. et al. PLoS One 16 (10), e0259141 (2021)
REBASE ref # 33388
Complete sequence: 5,024,072 bp
GenBank #: CP082775
REBASE acronym: EcoCU5683
Org_num: 53856
All begin K8B89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4905 | ash family protein | |||
| 4910 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoCU5683ORF4915P |
| 4915 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoCU5683ORF4915P |
| 4920 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoCU5683ORF4915P |
| 4925 | type IV toxin-antitoxin system AbiEi family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2940 | 100 aa hypothetical protein | |||
| 2945 | R | Sso8ORF19860P (100% identity) | EcoCU5683ORF2945P | |
| 2950 | HNH endonuclease | |||
| 8630 | 71 aa hypothetical protein | |||
| 8635 | M | M.KaeCRE8ORF15605P (100% identity) | M.EcoCU5683ORF8635P | |
| 8640 | helix-turn-helix domain-containing protein | |||
| 11260 | TrmB family transcriptional regulator | |||
| 11265 | M | M.SflC32ORFBP (100% identity) | M.EcoCU5683ORF11265P | |
| 11285 | tellurite resistance protein | |||
| 22145 | DNA-binding transcriptional regulator Fis | |||
| 22150 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoCU5683ORF22150P |
| 22155 | DUF2556 family protein | |||
| 22745 | ribulose-phosphate 3-epimerase | |||
| 22750 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCU5683DamP |
| 22755 | cell division protein DamX | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2925 | IS5-like element IS5 family transposase | |||
| 2930 | M | M.SflN116ORF19490P (46% identity) | M.EcoCU5683ORF2930P | |
| 2935 | R | SflN116ORF19490P (100% identity) | EcoCU5683ORF2930P | |
| 2940 | 100 aa hypothetical protein | |||