Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10330 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10330 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,998,888 bp | CP047542 |
| plasmid unnamed: | 216,197 bp | CP047543 |
REBASE acronym: Sen10330
Org_num: 55355
All begin DXN30_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3705 | AAA family ATPase | |||
| 3710 | RM | StyUK1IV (100% identity) | GATCAG | Sen10330ORF3710P |
| 3715 | BREX system P-loop protein BrxC | |||
| 14495 | drug/metabolite exporter YedA | |||
| 14500 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10330DcmP |
| 14505 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10330DcmP |
| 14510 | phosphohydrolase | |||
| 14750 | RusA family crossover junction | |||
| 14755 | M | M.SenPS1ORF9505P (100% identity) | M.Sen10330ORF14755P | |
| 14760 | PerC family transcriptional regulator | |||
| 18080 | 92 aa hypothetical protein | |||
| 18085 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10330ORF18085P |
| 18090 | ead/Ea22-like family protein | |||
| 18775 | nuclease | |||
| 18780 | M | M.StyCORF187P (49% identity) | M.Sen10330ORF18780P | |
| 18785 | IS6-like element IS26 family transposase | |||
| 21160 | replication endonuclease | |||
| 21165 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen10330ORF21165P |
| 21170 | DUF2732 family protein | |||
| 22080 | DNA-binding transcriptional regulator Fis | |||
| 22085 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10330ORF22085P |
| 22090 | DUF2556 domain-containing protein | |||
| 22580 | ribulose-phosphate 3-epimerase | |||
| 22585 | M | M.StyTDamP (100% identity) | GATC | M.Sen10330DamP |
| 22590 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 24430 | DUF1173 family protein | |||
| 24435 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10330ORF24435P |
| 24440 | nuclease | |||
| 24905 | 108 aa hypothetical protein | |||
| 24910 | M | M.YpsF1ORFBP (100% identity) | M.Sen10330ORF24910P | |
| 24915 | 202 aa hypothetical protein | |||
| 25020 | DNA-binding protein | |||
| 25025 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10330ORF25025P |
| 25030 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6390 | MFS transporter | |||
| 6395 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10330ORF6395P |
| 6400 | R | StyUK1IP (99% identity) | CAGAG | Sen10330ORF6395P |
| 6405 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3870 | type I restriction-modification system | |||
| 3875 | R | StyUK1MrrP (100% identity) | Sen10330MrrP | |
| 3880 | BrnT family toxin | |||