Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10057 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10057 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,996,934 bp | CP047550 |
| plasmid unnamedA: | 240,317 bp | CP047551 |
REBASE acronym: Sen10057
Org_num: 55349
All begin DXN07_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20525 | restriction endonuclease | |||
| 20530 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10057ORF20535P |
| 20535 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10057ORF20535P |
| 20540 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10057ORF20535P |
| 20545 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen10057DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 domain-containing protein | |||
| 2325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10057ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 5625 | IS6-like element IS26 family transposase | |||
| 5630 | M | M.StyCORF187P (49% identity) | M.Sen10057ORF5630P | |
| 5635 | nuclease | |||
| 6315 | ead/Ea22-like family protein | |||
| 6320 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10057ORF6320P |
| 6325 | 92 aa hypothetical protein | |||
| 9640 | PerC family transcriptional regulator | |||
| 9645 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen10057ORF9645P |
| 9650 | RusA family crossover junction | |||
| 9890 | phosphohydrolase | |||
| 9895 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10057DcmP |
| 9900 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10057DcmP |
| 9905 | drug/metabolite exporter YedA | |||
| 20685 | BREX system P-loop protein BrxC | |||
| 20690 | RM | StyUK1IV (100% identity) | GATCAG | Sen10057ORF20690P |
| 20695 | AAA family ATPase | |||
| plasmid unnamedA | ||||
| 24465 | 284 aa hypothetical protein | |||
| 24470 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10057ORF24470P |
| 24475 | DNA-binding protein | |||
| 24580 | 202 aa hypothetical protein | |||
| 24585 | M | M.YpsF1ORFBP (100% identity) | M.Sen10057ORF24585P | |
| 24590 | 108 aa hypothetical protein | |||
| 25215 | nuclease | |||
| 25220 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10057ORF25220P |
| 25225 | DUF1173 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17995 | 33 aa hypothetical protein | |||
| 18000 | R | StyUK1IP (99% identity) | CAGAG | Sen10057ORF18005P |
| 18005 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10057ORF18005P |
| 18010 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20520 | BrnT family toxin | |||
| 20525 | R | StyUK1MrrP (100% identity) | Sen10057MrrP | |
| 20530 | type I restriction-modification system | |||