Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10169 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10169 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,990,411 bp | CP047548 |
| plasmid unnamed: | 249,152 bp | CP047549 |
REBASE acronym: Sen10169
Org_num: 55351
All begin DXN26_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3855 | endoribonuclease SymE | |||
| 3860 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10169ORF3865P |
| 3865 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10169ORF3865P |
| 3870 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10169ORF3865P |
| 3875 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3705 | AAA family ATPase | |||
| 3710 | RM | StyUK1IV (100% identity) | GATCAG | Sen10169ORF3710P |
| 3715 | BREX system P-loop protein BrxC | |||
| 14495 | drug/metabolite exporter YedA | |||
| 14500 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10169DcmP |
| 14505 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10169DcmP |
| 14510 | phosphohydrolase | |||
| 18075 | 92 aa hypothetical protein | |||
| 18080 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10169ORF18080P |
| 18085 | ead/Ea22-like family protein | |||
| 18715 | nuclease | |||
| 18720 | M | M.StyCORF187P (49% identity) | M.Sen10169ORF18720P | |
| 18725 | IS6-like element IS26 family transposase | |||
| 21110 | replication endonuclease | |||
| 21115 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen10169ORF21115P |
| 21120 | DUF2732 family protein | |||
| 22030 | DNA-binding transcriptional regulator Fis | |||
| 22035 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10169ORF22035P |
| 22040 | DUF2556 domain-containing protein | |||
| 22530 | ribulose-phosphate 3-epimerase | |||
| 22535 | M | M.StyTDamP (100% identity) | GATC | M.Sen10169DamP |
| 22540 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 24730 | DUF1173 family protein | |||
| 24735 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10169ORF24735P |
| 24740 | nuclease | |||
| 25400 | 108 aa hypothetical protein | |||
| 25405 | M | M.YpsF1ORFBP (100% identity) | M.Sen10169ORF25405P | |
| 25410 | 202 aa hypothetical protein | |||
| 25515 | DNA-binding protein | |||
| 25520 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10169ORF25520P |
| 25525 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6390 | MFS transporter | |||
| 6395 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10169ORF6395P |
| 6400 | R | StyUK1IP (99% identity) | CAGAG | Sen10169ORF6395P |
| 6405 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3870 | type I restriction-modification system | |||
| 3875 | R | StyUK1MrrP (100% identity) | Sen10169MrrP | |
| 3880 | BrnT family toxin | |||