Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10231 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10231 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,996,725 bp | CP047553 |
| plasmid unnamed: | 213,570 bp | CP047554 |
REBASE acronym: Sen10231
Org_num: 55352
All begin DXN27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3855 | endoribonuclease SymE | |||
| 3860 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10231ORF3865P |
| 3865 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10231ORF3865P |
| 3870 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10231ORF3865P |
| 3875 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3705 | AAA family ATPase | |||
| 3710 | RM | StyUK1IV (100% identity) | GATCAG | Sen10231ORF3710P |
| 3715 | BREX system P-loop protein BrxC | |||
| 14490 | drug/metabolite exporter YedA | |||
| 14495 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10231DcmP |
| 14500 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10231DcmP |
| 14505 | phosphohydrolase | |||
| 14745 | RusA family crossover junction | |||
| 14750 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen10231ORF14750P |
| 14755 | PerC family transcriptional regulator | |||
| 18070 | 92 aa hypothetical protein | |||
| 18075 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10231ORF18075P |
| 18080 | ead/Ea22-like family protein | |||
| 18760 | nuclease | |||
| 18765 | M | M.StyCORF187P (49% identity) | M.Sen10231ORF18765P | |
| 18770 | IS6-like element IS26 family transposase | |||
| 22075 | DNA-binding transcriptional regulator Fis | |||
| 22080 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10231ORF22080P |
| 22085 | DUF2556 domain-containing protein | |||
| 22575 | ribulose-phosphate 3-epimerase | |||
| 22580 | M | M.StyTDamP (100% identity) | GATC | M.Sen10231DamP |
| 22585 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 24625 | DUF1173 family protein | |||
| 24630 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10231ORF24630P |
| 24635 | nuclease | |||
| 25065 | 108 aa hypothetical protein | |||
| 25070 | M | M.YpsF1ORFBP (100% identity) | M.Sen10231ORF25070P | |
| 25075 | 202 aa hypothetical protein | |||
| 25180 | DNA-binding protein | |||
| 25185 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10231ORF25185P |
| 25190 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6390 | MFS transporter | |||
| 6395 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10231ORF6395P |
| 6400 | R | StyUK1IP (99% identity) | CAGAG | Sen10231ORF6395P |
| 6405 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3870 | type I restriction-modification system | |||
| 3875 | R | StyUK1MrrP (100% identity) | Sen10231MrrP | |
| 3880 | BrnT family toxin | |||