Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10250 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10250 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 5,028,175 bp | CP047544 |
| plasmid unnamed: | 238,273 bp | CP047545 |
REBASE acronym: Sen10250
Org_num: 55354
All begin DXN29_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20705 | restriction endonuclease | |||
| 20710 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10250ORF20715P |
| 20715 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10250ORF20715P |
| 20720 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10250ORF20715P |
| 20725 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.StyTDamP (100% identity) | GATC | M.Sen10250DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 domain-containing protein | |||
| 2330 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10250ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 3245 | DUF2732 family protein | |||
| 3250 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen10250ORF3250P |
| 3255 | replication endonuclease | |||
| 5630 | IS6-like element IS26 family transposase | |||
| 5635 | M | M.StyCORF187P (49% identity) | M.Sen10250ORF5635P | |
| 5640 | nuclease | |||
| 6495 | ead/Ea22-like family protein | |||
| 6500 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10250ORF6500P |
| 6505 | 92 aa hypothetical protein | |||
| 10070 | phosphohydrolase | |||
| 10075 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10250DcmP |
| 10080 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10250DcmP |
| 10085 | drug/metabolite exporter YedA | |||
| 20865 | BREX system P-loop protein BrxC | |||
| 20870 | RM | StyUK1IV (100% identity) | GATCAG | Sen10250ORF20870P |
| 20875 | AAA family ATPase | |||
| plasmid unnamed | ||||
| 24700 | 108 aa hypothetical protein | |||
| 24705 | M | M.YpsF1ORFBP (100% identity) | M.Sen10250ORF24705P | |
| 24710 | 202 aa hypothetical protein | |||
| 24815 | DNA-binding protein | |||
| 24820 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10250ORF24820P |
| 24825 | 284 aa hypothetical protein | |||
| 25335 | DUF1173 family protein | |||
| 25340 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10250ORF25340P |
| 25345 | nuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18175 | 33 aa hypothetical protein | |||
| 18180 | R | StyUK1IP (99% identity) | CAGAG | Sen10250ORF18185P |
| 18185 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10250ORF18185P |
| 18190 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20700 | BrnT family toxin | |||
| 20705 | R | StyUK1MrrP (100% identity) | Sen10250MrrP | |
| 20710 | type I restriction-modification system | |||