Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10359 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10359 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,972,293 bp | CP047540 |
| plasmid unnamed: | 232,064 bp | CP047541 |
REBASE acronym: Sen10359
Org_num: 55356
All begin DXN31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20390 | restriction endonuclease | |||
| 20395 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10359ORF20400P |
| 20400 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10359ORF20400P |
| 20405 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10359ORF20400P |
| 20410 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.StyTDamP (100% identity) | GATC | M.Sen10359DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2320 | DUF2556 domain-containing protein | |||
| 2325 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10359ORF2325P |
| 2330 | DNA-binding transcriptional regulator Fis | |||
| 3240 | DUF2732 family protein | |||
| 3245 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen10359ORF3245P |
| 3250 | replication endonuclease | |||
| 5625 | IS6-like element IS26 family transposase | |||
| 5630 | M | M.StyCORF187P (49% identity) | M.Sen10359ORF5630P | |
| 5635 | nuclease | |||
| 6180 | ead/Ea22-like family protein | |||
| 6185 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10359ORF6185P |
| 6190 | 92 aa hypothetical protein | |||
| 9505 | PerC family transcriptional regulator | |||
| 9510 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen10359ORF9510P |
| 9515 | RusA family crossover junction | |||
| 9755 | phosphohydrolase | |||
| 9760 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10359DcmP |
| 9765 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10359DcmP |
| 9770 | drug/metabolite exporter YedA | |||
| plasmid unnamed | ||||
| 24750 | DUF1173 family protein | |||
| 24755 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10359ORF24755P |
| 24760 | nuclease | |||
| 25320 | 108 aa hypothetical protein | |||
| 25325 | M | M.YpsF1ORFBP (100% identity) | M.Sen10359ORF25325P | |
| 25330 | 202 aa hypothetical protein | |||
| 25435 | DNA-binding protein | |||
| 25440 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10359ORF25440P |
| 25445 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17860 | 33 aa hypothetical protein | |||
| 17865 | R | StyUK1IP (99% identity) | CAGAG | Sen10359ORF17870P |
| 17870 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10359ORF17870P |
| 17875 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20385 | BrnT family toxin | |||
| 20390 | R | StyUK1MrrP (100% identity) | Sen10359MrrP | |
| 20395 | type I restriction-modification system | |||