Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10640 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF10640 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,976,742 bp | CP047529 |
| plasmid unnamed: | 197,840 bp | CP047530 |
REBASE acronym: Sen10640
Org_num: 55360
All begin DXN10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3860 | endoribonuclease SymE | |||
| 3865 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen10640ORF3870P |
| 3870 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen10640ORF3870P |
| 3875 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen10640ORF3870P |
| 3880 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14550 | drug/metabolite exporter YedA | |||
| 14555 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen10640DcmP |
| 14560 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen10640DcmP |
| 14565 | phosphohydrolase | |||
| 14805 | RusA family crossover junction | |||
| 14810 | M | M.Ssp17155ORFIP (100% identity) | GATC | M.Sen10640ORF14810P |
| 14815 | PerC family transcriptional regulator | |||
| 18130 | 92 aa hypothetical protein | |||
| 18135 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen10640ORF18135P |
| 18140 | ead/Ea22-like family protein | |||
| 21010 | replication endonuclease | |||
| 21015 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen10640ORF21015P |
| 21020 | DUF2732 family protein | |||
| 21930 | DNA-binding transcriptional regulator Fis | |||
| 21935 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen10640ORF21935P |
| 21940 | DUF2556 domain-containing protein | |||
| 22430 | ribulose-phosphate 3-epimerase | |||
| 22435 | M | M.StyTDamP (100% identity) | GATC | M.Sen10640DamP |
| 22440 | cell division protein DamX | |||
| plasmid unnamed | ||||
| 24680 | DUF1173 family protein | |||
| 24685 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen10640ORF24685P |
| 24690 | nuclease | |||
| 25100 | DNA-binding protein | |||
| 25105 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen10640ORF25105P |
| 25110 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6445 | MFS transporter | |||
| 6450 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen10640ORF6450P |
| 6455 | R | StyUK1IP (99% identity) | CAGAG | Sen10640ORF6450P |
| 6460 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3875 | type I restriction-modification system | |||
| 3880 | R | StyUK1MrrP (100% identity) | Sen10640MrrP | |
| 3885 | BrnT family toxin | |||