Salmonella enterica subsp. enterica serovar Typhimurium SJTUF11077 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF11077 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 5,002,876 bp | CP047525 |
| plasmid unnamed: | 249,143 bp | CP047526 |
REBASE acronym: Sen11077
Org_num: 55362
All begin DXN14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20590 | restriction endonuclease | |||
| 20595 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen11077ORF20600P |
| 20600 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen11077ORF20600P |
| 20605 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen11077ORF20600P |
| 20610 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1825 | cell division protein DamX | |||
| 1830 | M | M.StyTDamP (100% identity) | GATC | M.Sen11077DamP |
| 1835 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 domain-containing protein | |||
| 2330 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen11077ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 3255 | DUF2732 family protein | |||
| 3260 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen11077ORF3260P |
| 3265 | replication endonuclease | |||
| 5645 | IS6-like element IS26 family transposase | |||
| 5650 | M | M.StyCORF187P (41% identity) | M.Sen11077ORF5650P | |
| 5655 | nuclease | |||
| 6020 | 92 aa hypothetical protein | |||
| 6025 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen11077ORF6025P |
| 6030 | ead/Ea22-like family protein | |||
| 9675 | PerC family transcriptional regulator | |||
| 9680 | M | M.SenPS1ORF9505P (100% identity) | M.Sen11077ORF9680P | |
| 9685 | RusA family crossover junction | |||
| 9925 | phosphohydrolase | |||
| 9930 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen11077DcmP |
| 9935 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen11077DcmP |
| 9940 | drug/metabolite exporter YedA | |||
| plasmid unnamed | ||||
| 24625 | 284 aa hypothetical protein | |||
| 24630 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen11077ORF24630P |
| 24635 | DNA-binding protein | |||
| 24740 | 202 aa hypothetical protein | |||
| 24745 | M | M.YpsF1ORFBP (100% identity) | M.Sen11077ORF24745P | |
| 24750 | 108 aa hypothetical protein | |||
| 25410 | nuclease | |||
| 25415 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen11077ORF25415P |
| 25420 | DUF1173 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18050 | 33 aa hypothetical protein | |||
| 18055 | R | StyUK1IP (99% identity) | CAGAG | Sen11077ORF18060P |
| 18060 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen11077ORF18060P |
| 18065 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20585 | BrnT family toxin | |||
| 20590 | R | StyUK1MrrP (100% identity) | Sen11077MrrP | |
| 20595 | type I restriction-modification system | |||