Salmonella enterica subsp. enterica serovar Typhimurium SJTUF11216 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium SJTUF11216 RM systems
Ref: Shang,D. et al. unpublished
REBASE ref # 33786
| Sequence length: | GenBank #: | |
| Chromosome: | 4,941,012 bp | CP047522 |
| plasmid unnamedA: | 195,873 bp | CP047523 |
| plasmid unnamedB: | 87,292 bp | CP047524 |
REBASE acronym: Sen11216
Org_num: 55363
All begin DXN15_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3855 | endoribonuclease SymE | |||
| 3860 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen11216ORF3865P |
| 3865 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen11216ORF3865P |
| 3870 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen11216ORF3865P |
| 3875 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14500 | drug/metabolite exporter YedA | |||
| 14505 | V | V.StyUK1DcmP (100% identity) | CCWGG | V.Sen11216DcmP |
| 14510 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen11216DcmP |
| 14515 | phosphohydrolase | |||
| 17790 | 92 aa hypothetical protein | |||
| 17795 | M | M.StyTORF1914P (100% identity) | ATGCAT | M.Sen11216ORF17795P |
| 17800 | ead/Ea22-like family protein | |||
| 18395 | nuclease | |||
| 18400 | M | M.StyCORF187P (49% identity) | M.Sen11216ORF18400P | |
| 18405 | IS6-like element IS26 family transposase | |||
| 20780 | replication endonuclease | |||
| 20785 | M | M.SensSZL38ORF19965P (100% identity) | GATC | M.Sen11216ORF20785P |
| 20790 | DUF2732 family protein | |||
| 21700 | DNA-binding transcriptional regulator Fis | |||
| 21705 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen11216ORF21705P |
| 21710 | DUF2556 domain-containing protein | |||
| 22200 | ribulose-phosphate 3-epimerase | |||
| 22205 | M | M.StyTDamP (100% identity) | GATC | M.Sen11216DamP |
| 22210 | cell division protein DamX | |||
| plasmid unnamedA | ||||
| 24100 | 202 aa hypothetical protein | |||
| 24105 | M | M.YpsF1ORFBP (100% identity) | M.Sen11216ORF24105P | |
| 24110 | 108 aa hypothetical protein | |||
| 24485 | nuclease | |||
| 24490 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Sen11216ORF24490P |
| 24495 | DUF1173 family protein | |||
| 25005 | 284 aa hypothetical protein | |||
| 25010 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Sen11216ORF25010P |
| 25015 | DNA-binding protein | |||
| plasmid unnamedB | ||||
| 25215 | 103 aa hypothetical protein | |||
| 25220 | M | M.Sso866ORF27155P (100% identity) | M.Sen11216ORF25220P | |
| 25225 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6400 | MFS transporter | |||
| 6405 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen11216ORF6405P |
| 6410 | R | StyUK1IP (99% identity) | CAGAG | Sen11216ORF6405P |
| 6415 | 33 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3870 | type I restriction-modification system | |||
| 3875 | R | StyUK1MrrP (100% identity) | Sen11216MrrP | |
| 3880 | BrnT family toxin | |||