Pseudomonas aeruginosa Pae1255-NDM1 |
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Putative Pseudomonas aeruginosa Pae1255-NDM1 RM systems
Ref: Kostyanev,T. et al. J Glob Antimicrob Resist 22, 672-673 (2020)
REBASE ref # 33691
Complete sequence: 6,944,358 bp
GenBank #: CP053747
REBASE acronym: PaeNDM1
Org_num: 54942
All begin HJ571_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 490 | site-specific integrase | |||
| 495 | M | M.PaePA99II (100% identity) | GATNNNNNNNRTGGC | M.PaeNDM1ORF495P |
| 500 | S | S.PaeLo565ORF25365P (100% identity) | GATNNNNNNNRTGGC | S.PaeNDM1ORF495P |
| 505 | R | PaeZM03ORFFP (100% identity) | GATNNNNNNNRTGGC | PaeNDM1ORF495P |
| 510 | helix-turn-helix transcriptional regulator | |||
| 12875 | 209 aa hypothetical protein | |||
| 12880 | M | M.PaesPA2ORF12950P (99% identity) | GAAGNNNNNTGA | M.PaeNDM1ORF12880P |
| 12885 | S | S.PaesPA2ORF12950P (100% identity) | GAAGNNNNNTGA | S.PaeNDM1ORF12880P |
| 12890 | AAA family ATPase | |||
| 12895 | DUF4276 family protein | |||
| 12900 | R | PaesPA2ORF12950P (100% identity) | GAAGNNNNNTGA | PaeNDM1ORF12880P |
| 12905 | alpha/beta hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12110 | 185 aa hypothetical protein | |||
| ??? | M | M.Sma503ORFBP (100% identity) | M.PaeNDM1ORF12115P | |
| 12120 | DNA topoisomerase III | |||
| 20770 | 174 aa hypothetical protein | |||
| 20775 | M | M.PaeLo229ORF19090P (99% identity) | M.PaeNDM1ORF20775P | |
| 20780 | 63 aa hypothetical protein | |||
| 23380 | 160 aa hypothetical protein | |||
| 23385 | M | M.Pae97ORF14170P (100% identity) | M.PaeNDM1ORF23385P | |
| 23390 | 127 aa hypothetical protein | |||
| 24675 | helix-turn-helix domain-containing protein | |||
| 24680 | M | M.PaePA99ORF6665P (100% identity) | M.PaeNDM1ORF24680P | |
| 24685 | V | V.PaePA99ORF6665P (100% identity) | V.PaeNDM1ORF24680P | |
| 24690 | ATP-binding protein | |||
| 24695 | R | Pae860ORF25045P (100% identity) | PaeNDM1ORF24680P | |
| 24700 | PD-(D/E)XK motif protein | |||
| 27380 | DEAD/DEAH box helicase | |||
| 27385 | RM | PstAGORF16520P (100% identity) | AAGAYC | PaeNDM1ORF27385P |
| 27390 | chromosome segregation protein SMC | |||
| 30345 | 83 aa hypothetical protein | |||
| 30350 | M | M.PaeZPPH33ORF28460P (100% identity) | M.PaeNDM1ORF30350P | |
| 30355 | 58 aa hypothetical protein | |||